Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_M06
(370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 28 1.8
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 28 2.4
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 28 2.4
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 28 2.4
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 28 2.4
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 28 2.4
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 28 2.4
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 28 2.4
Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical p... 27 3.2
Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical pr... 27 3.2
AC006742-5|AAF60496.1| 239|Caenorhabditis elegans Hypothetical ... 26 7.3
AC006742-4|AAF60495.1| 239|Caenorhabditis elegans Hypothetical ... 26 7.3
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 26 9.7
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 3 KPPSRTQLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 167
+P + +LK+ A ++ ++ +KLA K AA D VK A+ +++ EAA
Sbjct: 8 RPKTEKELKKEAEKAAKLA-KFEEKQKKLAEKKAAASDKPVKEAKAKKEQTVEAA 61
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 21 QLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 161
QLKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 147 QLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 21 QLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 161
QLKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 147 QLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 21 QLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 161
QLKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 147 QLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 21 QLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 161
QLKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 147 QLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 21 QLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 161
QLKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 147 QLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 21 QLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 161
QLKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 56 QLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 101
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 21 QLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 161
QLKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 147 QLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +3
Query: 39 NLAKEVGVNMDQTSQKLAPKLKAA--YDDFVKHAEEVQ 146
+L KE+G+ DQ + AP++++A ++ VK+ E++Q
Sbjct: 411 DLRKELGLTQDQEIPRKAPRVESAETEENIVKNLEKLQ 448
>Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +3
Query: 39 NLAKEVGVNMDQTSQKLAPKLKAA--YDDFVKHAEEVQ 146
+L KE+G+ DQ + AP++++A ++ VK+ E++Q
Sbjct: 411 DLRKELGLTQDQEIPRKAPRVESAETEENIVKNLEKLQ 448
>AC006742-5|AAF60496.1| 239|Caenorhabditis elegans Hypothetical
protein Y38C1AB.7 protein.
Length = 239
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 18 TQLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 161
T+++E L + + D TSQKLA +++ F + E+QKK +
Sbjct: 149 TKMEEMMQLMR--ALIQDLTSQKLAQNPESSKCSFPNYGLEIQKKFED 194
>AC006742-4|AAF60495.1| 239|Caenorhabditis elegans Hypothetical
protein Y38C1AB.3 protein.
Length = 239
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 18 TQLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 161
T+++E L + + D TSQKLA +++ F + E+QKK +
Sbjct: 149 TKMEEMMQLMR--ALIQDLTSQKLAQNPESSKCSFPNYGLEIQKKFED 194
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 38 EPGEGSRRQHGSDLTETGAKTESGI 112
E GE R+HG ET AKT + +
Sbjct: 132 EEGEAFAREHGLVFMETSAKTAANV 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,114,033
Number of Sequences: 27780
Number of extensions: 98870
Number of successful extensions: 270
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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