Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_M04
         (400 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   0.84 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.9  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = +1

Query: 118 VKLIDEVIYEVTGKTVIRTQDDIHIDGF-NPSAEEADEGTDSNVETGVDIVLN 273
           + LIDE+ Y      +I   DDI    F N     AD   +      VDI LN
Sbjct: 525 ISLIDEISYMAPPAPLISQYDDIDPQQFCNGDNRPADCQQNCMCTHKVDIPLN 577


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -2

Query: 207 GVKSINVDIVLCSDHGLAGDFINNFVDQLNFI-RIREHLVTSYNILIDYHFDGLE 46
           G+K +N  + +    G   D  + F   ++   R RE + ++   +  Y+FDG++
Sbjct: 240 GLKRVNPKLKVLISVGEGRDGSHRFSTMVSSANRRREFIRSAITFIKQYNFDGMD 294



 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 173 HKTISTLMDLTPRPRRLTKGRIPTW 247
           H T+   + LTP  +R+    IP++
Sbjct: 5   HITLCAFLILTPTDQRVVTRTIPSF 29


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 252 WCRHSPESQASRN 290
           WC +S  S ASR+
Sbjct: 147 WCNYSAYSSASRH 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,318
Number of Sequences: 336
Number of extensions: 2053
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)