Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_L23
         (380 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   0.45 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   1.0  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   1.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   1.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   3.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   3.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   4.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.2  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 0.45
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 71  SLKSLVNTSNNMRISRSSGPTPGYAGKRVLSLSTLT 178
           +LK + N  NN     +S P PG   K   ++ + T
Sbjct: 54  ALKKIYNIQNNFEYDTASLPLPGLYTKSANTIRSFT 89


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 312 ERTRSDPHKNSYPWVR*QND 371
           E + S+P  N YPW++   D
Sbjct: 158 ENSVSEPPANFYPWMKAHGD 177


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 312 ERTRSDPHKNSYPWVR*QND 371
           E + S+P  N YPW++   D
Sbjct: 158 ENSVSEPPANFYPWMKAHGD 177


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 312 ERTRSDPHKNSYPWVR*QND 371
           E + S+P  N YPW++   D
Sbjct: 158 ENSVSEPPANFYPWMKAHGD 177


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 16/62 (25%), Positives = 25/62 (40%)
 Frame = +1

Query: 40  LLVGVNSRYVLVEEPG*YIEQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGN 219
           +L  +N+     E P   +   E QP Q   S   + +   T +S        K P +GN
Sbjct: 378 ILNAINAALKSDEIPPEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTPESGN 437

Query: 220 EN 225
           E+
Sbjct: 438 ES 439


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 126 GQLQGTPASGC 158
           G LQG P SGC
Sbjct: 305 GLLQGDPLSGC 315


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -3

Query: 279 SQLHLISEIYGAKSTEPVIFVSSYRYLDH 193
           S + L++    A  T P++ ++ Y+ LD+
Sbjct: 188 SLICLLAWFIAALFTSPMLVIAEYKQLDY 216


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/44 (20%), Positives = 21/44 (47%)
 Frame = +2

Query: 62  GTCSLKSLVNTSNNMRISRSSGPTPGYAGKRVLSLSTLTAPQVL 193
           GT  ++++   S+       +  + GY+ +  L +  +  PQ+L
Sbjct: 563 GTLIIENVERASDQATYDCVAKNSQGYSARGSLEVQVMVPPQIL 606


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,109
Number of Sequences: 336
Number of extensions: 1547
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)