SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_L23
         (380 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025998-1|AAH25998.1|  605|Homo sapiens family with sequence si...    34   0.18 
BC025409-1|AAH25409.1|  605|Homo sapiens family with sequence si...    34   0.18 
BC025397-1|AAH25397.1|  605|Homo sapiens family with sequence si...    34   0.18 
BC022035-1|AAH22035.1|  605|Homo sapiens family with sequence si...    34   0.18 
AY973323-1|AAY41236.1|  605|Homo sapiens HSD-51 protein.               34   0.18 
AK057543-1|BAB71526.1|  605|Homo sapiens protein ( Homo sapiens ...    34   0.18 
BC040518-1|AAH40518.1|  904|Homo sapiens MAP7D3 protein protein.       31   1.2  
EF415484-1|ABO27065.1|  108|Homo sapiens T cell receptor beta ch...    30   2.2  
AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein.     30   2.2  
BC109088-1|AAI09089.1|  248|Homo sapiens ZNF509 protein protein.       30   2.9  
BC109087-1|AAI09088.1|  765|Homo sapiens zinc finger protein 509...    30   2.9  
BC089401-1|AAH89401.1|  379|Homo sapiens ZNF509 protein protein.       30   2.9  
BC016477-1|AAH16477.1|  248|Homo sapiens ZNF509 protein protein.       30   2.9  
AK127560-1|BAC87035.1|  765|Homo sapiens protein ( Homo sapiens ...    30   2.9  
AB209466-1|BAD92703.1|  262|Homo sapiens zinc finger protein 509...    30   2.9  
BC064350-1|AAH64350.1|  801|Homo sapiens MAP7D3 protein protein.       29   5.0  
AY360172-1|AAQ98857.1|  693|Homo sapiens transducer of regulated...    29   5.0  
AL078638-13|CAM21578.1|  802|Homo sapiens MAP7 domain containing...    29   5.0  
AL078638-12|CAI41063.2|  876|Homo sapiens MAP7 domain containing...    29   5.0  
AL078638-11|CAI41064.2|  841|Homo sapiens MAP7 domain containing...    29   5.0  
AK022463-1|BAB14044.1|  507|Homo sapiens protein ( Homo sapiens ...    29   5.0  
S55790-1|AAB19637.1|  218|Homo sapiens type IV collagen alpha 3 ...    28   8.7  
BC142617-1|AAI42618.1|  888|Homo sapiens sema domain, transmembr...    28   8.7  
AY358939-1|AAQ89298.1|  888|Homo sapiens semaphorin Z protein.         28   8.7  
AB209278-1|BAD92515.1|  518|Homo sapiens semaphorin 6B isoform 3...    28   8.7  
AB022433-1|BAB20669.1|  888|Homo sapiens semaphorin Z protein.         28   8.7  

>BC025998-1|AAH25998.1|  605|Homo sapiens family with sequence
           similarity 71, member B protein.
          Length = 605

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +1

Query: 130 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 294
           N   +  AGA  I+S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>BC025409-1|AAH25409.1|  605|Homo sapiens family with sequence
           similarity 71, member B protein.
          Length = 605

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +1

Query: 130 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 294
           N   +  AGA  I+S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>BC025397-1|AAH25397.1|  605|Homo sapiens family with sequence
           similarity 71, member B protein.
          Length = 605

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +1

Query: 130 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 294
           N   +  AGA  I+S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>BC022035-1|AAH22035.1|  605|Homo sapiens family with sequence
           similarity 71, member B protein.
          Length = 605

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +1

Query: 130 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 294
           N   +  AGA  I+S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>AY973323-1|AAY41236.1|  605|Homo sapiens HSD-51 protein.
          Length = 605

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +1

Query: 130 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 294
           N   +  AGA  I+S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>AK057543-1|BAB71526.1|  605|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32981 fis, clone TESTI3000002, weakly similar to
           L.mexicana lmsap2 gene for secreted acid phosphatase 2
           (SAP2). ).
          Length = 605

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +1

Query: 130 NSRVRRQAGALTINSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 294
           N   +  AGA  I+S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>BC040518-1|AAH40518.1|  904|Homo sapiens MAP7D3 protein protein.
          Length = 904

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 20  SYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTP 136
           SY+ C + WS+S A  C L S ++T  N +I ++  P+P
Sbjct: 518 SYTEC-YKWSSSPANACGLPSPIST--NRQIQKNCPPSP 553


>EF415484-1|ABO27065.1|  108|Homo sapiens T cell receptor beta chain
           protein.
          Length = 108

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 2   TQRCSPSYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTPGYAGKRV-LSLSTL 175
           T RC P  ++  FFW   T     L+ L+  +NN+ I  S  P   ++ K    S STL
Sbjct: 13  TLRCKPIQATTPFFWYRQTM-MRGLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTL 70


>AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein.
          Length = 1583

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 17  PSYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTPGYAGKRVL 160
           PS+     F    +  T + KSL+ TS +  + R   P PG+ G   L
Sbjct: 28  PSFPGGSMFRRTKSCRTSNRKSLILTSTSPTLPRPHSPLPGHLGSSPL 75


>BC109088-1|AAI09089.1|  248|Homo sapiens ZNF509 protein protein.
          Length = 248

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 49  GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 222
           GV+ +  L  +PG     +  + QP+ +A S V   AG   + +DG   AM++  +   +
Sbjct: 146 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 203

Query: 223 NHRLSALGS 249
           NH    LGS
Sbjct: 204 NHGGDPLGS 212


>BC109087-1|AAI09088.1|  765|Homo sapiens zinc finger protein 509
           protein.
          Length = 765

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 49  GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 222
           GV+ +  L  +PG     +  + QP+ +A S V   AG   + +DG   AM++  +   +
Sbjct: 663 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 720

Query: 223 NHRLSALGS 249
           NH    LGS
Sbjct: 721 NHGGDPLGS 729


>BC089401-1|AAH89401.1|  379|Homo sapiens ZNF509 protein protein.
          Length = 379

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 49  GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 222
           GV+ +  L  +PG     +  + QP+ +A S V   AG   + +DG   AM++  +   +
Sbjct: 277 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 334

Query: 223 NHRLSALGS 249
           NH    LGS
Sbjct: 335 NHGGDPLGS 343


>BC016477-1|AAH16477.1|  248|Homo sapiens ZNF509 protein protein.
          Length = 248

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 49  GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 222
           GV+ +  L  +PG     +  + QP+ +A S V   AG   + +DG   AM++  +   +
Sbjct: 146 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 203

Query: 223 NHRLSALGS 249
           NH    LGS
Sbjct: 204 NHGGDPLGS 212


>AK127560-1|BAC87035.1|  765|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45653 fis, clone CTONG2011801, moderately
           similar to Zinc finger protein 91. ).
          Length = 765

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 49  GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 222
           GV+ +  L  +PG     +  + QP+ +A S V   AG   + +DG   AM++  +   +
Sbjct: 663 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 720

Query: 223 NHRLSALGS 249
           NH    LGS
Sbjct: 721 NHGGDPLGS 729


>AB209466-1|BAD92703.1|  262|Homo sapiens zinc finger protein 509
           variant protein.
          Length = 262

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 49  GVNSRYVLVEEPG*YI--EQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNE 222
           GV+ +  L  +PG     +  + QP+ +A S V   AG   + +DG   AM++  +   +
Sbjct: 160 GVSDQEKLSLDPGKLAKPQMQQTQPQAYAYSDVDTPAGGEPLQADGM--AMIRSSLAALD 217

Query: 223 NHRLSALGS 249
           NH    LGS
Sbjct: 218 NHGGDPLGS 226


>BC064350-1|AAH64350.1|  801|Homo sapiens MAP7D3 protein protein.
          Length = 801

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 20  SYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTP 136
           SY+ C + WS+S    C L S ++T  N +I ++  P+P
Sbjct: 448 SYTEC-YKWSSSPENACGLPSPIST--NRQIQKNCPPSP 483


>AY360172-1|AAQ98857.1|  693|Homo sapiens transducer of regulated
           CREB protein 2 protein.
          Length = 693

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 53  STAGTCSLKSLVNTSNNMRISRSSGPTPGY 142
           S +G  S  +L +T  ++ ISR  GP PGY
Sbjct: 300 SLSGGNSTSNLTHTMTHLGISRGHGPGPGY 329


>AL078638-13|CAM21578.1|  802|Homo sapiens MAP7 domain containing 3
           protein.
          Length = 802

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 20  SYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTP 136
           SY+ C + WS+S    C L S ++T  N +I ++  P+P
Sbjct: 449 SYTEC-YKWSSSPENACGLPSPIST--NRQIQKNCPPSP 484


>AL078638-12|CAI41063.2|  876|Homo sapiens MAP7 domain containing 3
           protein.
          Length = 876

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 20  SYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTP 136
           SY+ C + WS+S    C L S ++T  N +I ++  P+P
Sbjct: 490 SYTEC-YKWSSSPENACGLPSPIST--NRQIQKNCPPSP 525


>AL078638-11|CAI41064.2|  841|Homo sapiens MAP7 domain containing 3
           protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 20  SYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTP 136
           SY+ C + WS+S    C L S ++T  N +I ++  P+P
Sbjct: 455 SYTEC-YKWSSSPENACGLPSPIST--NRQIQKNCPPSP 490


>AK022463-1|BAB14044.1|  507|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12401 fis, clone MAMMA1002796. ).
          Length = 507

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 20  SYSSCQFFWSASTAGTCSLKSLVNTSNNMRISRSSGPTP 136
           SY+ C + WS+S    C L S ++T  N +I ++  P+P
Sbjct: 356 SYTEC-YKWSSSPENACGLPSPIST--NRQIQKNCPPSP 391


>S55790-1|AAB19637.1|  218|Homo sapiens type IV collagen alpha 3
           chain protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 108 GSAGAVGQLQGTPASGCSHYQL*RHLRCYGQGTYNWKRKS 227
           GS GA GQ   +P S    ++    L C+G+GT N+   S
Sbjct: 138 GSEGA-GQALASPGSCLEEFRASPFLECHGRGTCNYYSNS 176


>BC142617-1|AAI42618.1|  888|Homo sapiens sema domain, transmembrane
           domain (TM), and cytoplasmic domain, (semaphorin) 6B
           protein.
          Length = 888

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 47  SASTAGTCSLKSLVNTSNNMRISRSSGPTPGYAGKRVLSL 166
           +AST+GT  L   +      R  R   P  G  G+R+LSL
Sbjct: 462 NASTSGTSGLSVFLEEFETYRPDRCGRPGGGETGQRLLSL 501


>AY358939-1|AAQ89298.1|  888|Homo sapiens semaphorin Z protein.
          Length = 888

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 47  SASTAGTCSLKSLVNTSNNMRISRSSGPTPGYAGKRVLSL 166
           +AST+GT  L   +      R  R   P  G  G+R+LSL
Sbjct: 462 NASTSGTSGLSVFLEEFETYRPDRCGRPGGGETGQRLLSL 501


>AB209278-1|BAD92515.1|  518|Homo sapiens semaphorin 6B isoform 3
           precursor variant protein.
          Length = 518

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 47  SASTAGTCSLKSLVNTSNNMRISRSSGPTPGYAGKRVLSL 166
           +AST+GT  L   +      R  R   P  G  G+R+LSL
Sbjct: 92  NASTSGTSGLSVFLEEFETYRPDRCGRPGGGETGQRLLSL 131


>AB022433-1|BAB20669.1|  888|Homo sapiens semaphorin Z protein.
          Length = 888

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 47  SASTAGTCSLKSLVNTSNNMRISRSSGPTPGYAGKRVLSL 166
           +AST+GT  L   +      R  R   P  G  G+R+LSL
Sbjct: 462 NASTSGTSGLSVFLEEFETYRPDRCGRPGGGETGQRLLSL 501


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,806,957
Number of Sequences: 237096
Number of extensions: 1055458
Number of successful extensions: 2098
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -