Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_L19
(275 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0070 + 27479654-27479672,27479864-27479922,27480339-274803... 102 5e-23
01_06_0260 - 27959188-27959251,27959342-27959424,27960220-279603... 101 1e-22
12_01_0151 - 1158834-1159703,1159917-1160092,1160144-1162097,116... 28 0.93
12_02_0648 + 21490202-21490296,21490547-21490634,21491216-214912... 27 1.6
02_05_0975 + 33227431-33227730,33228556-33228636,33228883-332296... 27 2.1
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 26 3.7
05_01_0114 + 770049-770286,771007-771605 26 3.7
04_03_1034 - 21865633-21865811,21865838-21865860,21866345-218664... 26 3.7
07_01_0104 + 796572-796644,796780-796820,797603-797722 26 5.0
02_05_0982 - 33303500-33304011,33304091-33304208,33304606-333047... 26 5.0
09_03_0074 + 12103454-12103613,12104102-12104183,12105145-121052... 25 6.5
06_03_0749 + 24133302-24134274,24134585-24135272,24135751-241358... 25 6.5
02_03_0063 + 14600318-14600322,14600936-14601011,14601615-14601776 25 6.5
12_02_0127 + 13961726-13961947,13962050-13962121,13962288-139630... 25 8.7
01_02_0071 + 10822008-10822011,10822219-10822364,10822452-108225... 25 8.7
>05_07_0070 +
27479654-27479672,27479864-27479922,27480339-27480378,
27480477-27480565,27481065-27481147,27481219-27481282
Length = 117
Score = 102 bits (244), Expect = 5e-23
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +3
Query: 63 KMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVCIWSL*R 242
++ KRTKK GI GKYGTRYGASLRK +KKMEV+QH+KY C FCGK A+KR V IW
Sbjct: 25 ELTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKD 84
Query: 243 CKRTVAGGAW 272
C + AGGA+
Sbjct: 85 CGKVKAGGAY 94
>01_06_0260 -
27959188-27959251,27959342-27959424,27960220-27960308,
27960388-27960427,27960938-27960981,27961240-27961288
Length = 122
Score = 101 bits (241), Expect = 1e-22
Identities = 45/67 (67%), Positives = 51/67 (76%)
Frame = +3
Query: 72 KRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVCIWSL*RCKR 251
KRTKK GI GKYGTRYGASLRK +KKMEV+QH+KY C FCGK A+KR V IW C +
Sbjct: 33 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGK 92
Query: 252 TVAGGAW 272
AGGA+
Sbjct: 93 VKAGGAY 99
>12_01_0151 -
1158834-1159703,1159917-1160092,1160144-1162097,
1162360-1162620,1162729-1162916,1164127-1164166
Length = 1162
Score = 28.3 bits (60), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 164 LSYFHLFDHFT*RCTITCAIF 102
LSYFHL DH +C + C+IF
Sbjct: 314 LSYFHLPDHLK-QCFVYCSIF 333
>12_02_0648 +
21490202-21490296,21490547-21490634,21491216-21491260,
21491355-21491387,21491480-21491557,21491647-21491690,
21491765-21491805,21492102-21492184,21492261-21492352,
21492468-21492537,21492838-21492876,21493670-21493687,
21494586-21494713,21495235-21495358,21495585-21495716,
21496092-21496223,21496582-21496665
Length = 441
Score = 27.5 bits (58), Expect = 1.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 153 EVTQHAKYTCSFCGKDAM 206
E+ +H KYTC C K A+
Sbjct: 194 EMVEHNKYTCPICSKTAL 211
>02_05_0975 + 33227431-33227730,33228556-33228636,33228883-33229680,
33230829-33231005,33231159-33231274,33231422-33231520,
33231598-33232040,33232147-33232184,33232343-33232600,
33233378-33233525,33233989-33234108,33234884-33234984,
33235090-33235213,33235386-33235498,33236103-33236214,
33236298-33236432,33236527-33236593,33236685-33236741,
33236774-33236900,33237221-33237338,33237418-33237929
Length = 1347
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 167 CEIHLLILRQGCHETFMCMHLVTVTVQEN 253
C +L + Q C E +C+H+VT N
Sbjct: 997 CGSYLFTILQKCKECVLCLHIVTALYSLN 1025
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 203 HETFMCMHLVTVTVQENRSWRSL 271
HE +C+H+ + VQEN R L
Sbjct: 1637 HEVLLCIHVALLCVQENPDDRPL 1659
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 203 HETFMCMHLVTVTVQENRSWRSL 271
HE +C+H+ + VQEN R L
Sbjct: 2390 HEVLLCIHVALLCVQENPDDRPL 2412
>05_01_0114 + 770049-770286,771007-771605
Length = 278
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 43 RVRQVN*KWPNAPRRSELLVNMAHVMVHLYVKWSKRW 153
R+R VN P +R + + +++HL+ +W RW
Sbjct: 89 RLRWVNYLHPGL-KRGRITADEERLILHLHSQWGSRW 124
>04_03_1034 -
21865633-21865811,21865838-21865860,21866345-21866433,
21872484-21872894,21872968-21873284,21873389-21873467,
21873539-21873903,21874484-21874656,21874824-21874913,
21875797-21875862,21876615-21876661
Length = 612
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 137 NGQKDGSNSTCEIHLLILRQG 199
NG+KDGS S C+I +I+ G
Sbjct: 152 NGRKDGSVSACKILKVIIGSG 172
>07_01_0104 + 796572-796644,796780-796820,797603-797722
Length = 77
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -3
Query: 270 KLLQLRFSCTVTVTRCIHMNVSWHPCRRMSKCISHVE 160
K+ F CT + T+C + HP ++ C H++
Sbjct: 40 KICMQTFICTTSETKCKEHAEAKHPKSDLTACFPHLK 76
>02_05_0982 - 33303500-33304011,33304091-33304208,33304606-33304726,
33304811-33304877,33304968-33305102,33305186-33305297,
33305852-33306009,33306177-33306300,33306406-33306542,
33307284-33307403,33307878-33308025,33308674-33308931,
33309090-33309127,33309232-33309674,33309761-33309845,
33310063-33310123,33310277-33310453,33311611-33312408,
33314394-33314693
Length = 1303
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 167 CEIHLLILRQGCHETFMCMHLVTVTVQEN 253
C +L + Q C E C+H+VT N
Sbjct: 974 CGSYLFTVLQKCKECVFCLHIVTALYSLN 1002
>09_03_0074 +
12103454-12103613,12104102-12104183,12105145-12105200,
12105671-12106048,12106402-12106565
Length = 279
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 87 PSW-CVWPFLVNLSNPRAVFLSRGDPLVL 4
PSW C W +NP AV L DP+V+
Sbjct: 17 PSWICGW-LASRGANPTAVVLGEADPVVV 44
>06_03_0749 +
24133302-24134274,24134585-24135272,24135751-24135857,
24137565-24137815
Length = 672
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -3
Query: 252 FSCTVTVTRCIHMNVSWHPCRRMSKCISHVELLPSF 145
+ C+V C+ V HPC +S S +++ F
Sbjct: 613 YICSVARANCLPSPVPSHPCAHVSLSTSAIQITLQF 648
>02_03_0063 + 14600318-14600322,14600936-14601011,14601615-14601776
Length = 80
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 60 LKMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAK 173
L + K + G+T + +RY LR+ ++K+EV K
Sbjct: 22 LLLHKNQVRHGVTARRTSRYYVVLRRELRKLEVVGKVK 59
>12_02_0127 +
13961726-13961947,13962050-13962121,13962288-13963058,
13963401-13963573,13963973-13964083,13964114-13964460,
13964627-13964652
Length = 573
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 152 GSNSTCEIHLLILRQGCHETFMCMHLVTVTVQEN 253
G+ S+C+ H ++ ++GC+ F V T E+
Sbjct: 2 GALSSCKCHYIVQKKGCNAIFFIYPNVQGTEAES 35
>01_02_0071 +
10822008-10822011,10822219-10822364,10822452-10822544,
10822722-10822781,10822855-10823127,10823229-10823303,
10823419-10823475,10823593-10823733,10823813-10823863,
10823905-10823955,10823956-10824051,10824159-10824242,
10824330-10824432,10824518-10824600
Length = 438
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 120 GASLRKMVKKMEVTQHAKYTCSFCG 194
GAS+ +VK V QHAK C+F G
Sbjct: 415 GASMEFLVKL--VPQHAKKQCAFLG 437
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,532,439
Number of Sequences: 37544
Number of extensions: 163392
Number of successful extensions: 345
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 268461864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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