Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_L18
(413 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0915 + 28755584-28756139,28756695-28756846,28756994-287569... 31 0.28
10_01_0039 + 447573-448911,451247-451296,451322-451423 30 0.84
10_01_0037 + 434995-436299 28 2.6
09_06_0216 + 21627238-21627834 28 2.6
08_01_0422 + 3737429-3738006,3738083-3738824 28 2.6
08_01_0822 + 7976216-7978498,7978612-7978698,7979052-7979195 28 3.4
06_01_1090 - 8945909-8946125,8946607-8947562,8947733-8949835 28 3.4
11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779... 27 4.5
08_02_0141 - 13112399-13112514,13112898-13112994,13113113-13113430 27 4.5
06_03_0987 - 26589277-26589420,26589620-26589774,26589845-26589890 27 4.5
05_05_0299 - 23930657-23932627 27 5.9
04_04_0144 - 23095172-23095830,23095915-23097265 27 5.9
03_06_0042 + 31247084-31247641,31248396-31248482,31248684-312487... 27 5.9
02_04_0217 + 20992238-20992397,20992488-20992792,20992910-209930... 27 5.9
12_02_0029 - 12459565-12459804,12460013-12460121,12460507-124605... 27 7.8
11_06_0501 + 24368028-24368222 27 7.8
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 27 7.8
06_03_0339 - 19687749-19690805 27 7.8
04_04_0090 - 22747049-22747282,22747438-22747847,22748562-227487... 27 7.8
03_01_0117 + 925850-925988,926075-926494,926607-926785,927568-92... 27 7.8
>03_05_0915 +
28755584-28756139,28756695-28756846,28756994-28756996,
28757587-28757690,28758033-28758121,28758682-28758825,
28759194-28759291,28759380-28759502,28760045-28760113,
28760206-28760406
Length = 512
Score = 31.5 bits (68), Expect = 0.28
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 156 FLRPQASDEGQYQCFAETPAGVASSRVIS 242
FLRP A+D Y CF GVAS ++I+
Sbjct: 274 FLRPNAADLSDYGCFVVLALGVASLQMIA 302
>10_01_0039 + 447573-448911,451247-451296,451322-451423
Length = 496
Score = 29.9 bits (64), Expect = 0.84
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 335 RLHTVQLERPAFDWRFLVCLRWRCDEVSLPEADHPR 228
RL +L R D++ L WRC +LP A H R
Sbjct: 259 RLLPARLGRRCTDFQLLAATLWRCRTAALPYAPHRR 294
>10_01_0037 + 434995-436299
Length = 434
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 335 RLHTVQLERPAFDWRFLVCLRWRCDEVSLPEADHPR 228
RL L R D++ L WRC +LP A H R
Sbjct: 258 RLLPAPLGRRCTDFQLLPAALWRCRTAALPYAPHRR 293
>09_06_0216 + 21627238-21627834
Length = 198
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 44 SHRRKRSGSQVLLAKGWEIFQLAG 115
SH RKR+ +Q +LAK ++F AG
Sbjct: 108 SHYRKRAAAQDVLAKAQDVFNQAG 131
>08_01_0422 + 3737429-3738006,3738083-3738824
Length = 439
Score = 28.3 bits (60), Expect = 2.6
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 78 SWQKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCF--AETP 212
SWQ G+ W++ A R+D V LR + +GQ C AETP
Sbjct: 282 SWQPWGRLEAWRDQGGAARQD---TVCLRLRLLPDGQDACMLVAETP 325
>08_01_0822 + 7976216-7978498,7978612-7978698,7979052-7979195
Length = 837
Score = 27.9 bits (59), Expect = 3.4
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -2
Query: 118 CSCQLKDFPSFCQEYLTP*SFPSMRHSRTVGLF 20
C+C++ F ++C + + P + + HS LF
Sbjct: 390 CACEIAMFDTYCSKQMLPMRYGKIDHSSNTTLF 422
>06_01_1090 - 8945909-8946125,8946607-8947562,8947733-8949835
Length = 1091
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 145 PSSLRRAALCSCQLKDFPSFCQ 80
P SLRR ++ +C+ DFP++ Q
Sbjct: 911 PPSLRRLSIVNCRKLDFPAYLQ 932
>11_06_0578 +
25176304-25176388,25176503-25177032,25177267-25177997,
25178122-25178172,25178562-25178813,25178894-25179004,
25179102-25179183,25179460-25179489
Length = 623
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 93 GKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCFAETP 212
GK++ W + + DEG ++F P +E Y AE P
Sbjct: 178 GKNWVWARNTDQV-SDEGDILFETPDIEEEHFYSLAAENP 216
>08_02_0141 - 13112399-13112514,13112898-13112994,13113113-13113430
Length = 176
Score = 27.5 bits (58), Expect = 4.5
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 196 ASLKPQPVLPARG*SASGRLTSSHRQRRHTRKRQSKAGLSN 318
ASL P+PVLPA +A+ +SS R R S G SN
Sbjct: 2 ASLLPRPVLPA---AAAASTSSSSRCRYRITTSSSARGWSN 39
>06_03_0987 - 26589277-26589420,26589620-26589774,26589845-26589890
Length = 114
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 260 EVSLPEADHPRAGNTGWGF 204
EV LP + PR G+ WGF
Sbjct: 24 EVQLPRGNDPRGGSYPWGF 42
>05_05_0299 - 23930657-23932627
Length = 656
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 196 ASLKPQPVLPARG*SASGRLTSSHRQRRHTRKRQSK 303
AS +P+ LP A G+ S+ +RR R+R+ K
Sbjct: 601 ASSEPEKELPNEQGDADGKAKSTRSERRKRRRRELK 636
>04_04_0144 - 23095172-23095830,23095915-23097265
Length = 669
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 210 PAGVASSRVISFRKTYLIASPAKTHEKTPI 299
PAG SSRV +R ++A P + +K +
Sbjct: 518 PAGAPSSRVAGYRAPEVVADPWRLSQKADV 547
>03_06_0042 +
31247084-31247641,31248396-31248482,31248684-31248779,
31248897-31248998,31249455-31249541,31249692-31249759,
31249879-31249963
Length = 360
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 219 VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQL-DCVQPNAY 344
V SSR +R L+AS ++ P EG+ + + D P A+
Sbjct: 57 VISSRGFPYRSLRLLASERSAGKRLPFEGQEYTVQDLAAPGAF 99
>02_04_0217 +
20992238-20992397,20992488-20992792,20992910-20993038,
20993476-20993631
Length = 249
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 244 SGRLTSSHRQRRHTRKR-QSKAGLSNWTVC 330
S LTSS RR RKR S +NW +C
Sbjct: 134 SSNLTSSSSNRRSHRKRGHSSMESNNWVLC 163
>12_02_0029 -
12459565-12459804,12460013-12460121,12460507-12460599,
12460965-12461208,12462302-12462338
Length = 240
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 84 QKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEG 185
Q +G W+ NAA R+ G V ++ + +EG
Sbjct: 203 QDNGVQAKWESFNAAARRGWGGGVVVKQRGGEEG 236
>11_06_0501 + 24368028-24368222
Length = 64
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +3
Query: 33 VLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDE 143
++E +I+G+D S+++D SF +++ N + KD+
Sbjct: 1 MVEFVIDGDDLEFTLSYEEDELSFLFEKSNELMLKDQ 37
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 225 SSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPKPLITW 365
+S+++S +KT +PA KT I GR L + PN L+ W
Sbjct: 197 TSQLLSAKKT----NPAAHSSKTEIGGRNAILKLLSPNLIRSSLLLW 239
>06_03_0339 - 19687749-19690805
Length = 1018
Score = 26.6 bits (56), Expect = 7.8
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -2
Query: 217 PAGVSAKHWYWPSSDACGLRNTRDPSSLRRAALCSCQLKDFPSFCQEYLTP*SFPSMRHS 38
P+ S +W CG+R S L++A C LK F + L + PS +
Sbjct: 173 PSNPSDSQTFWTICPTCGMRYQYYLSILKKALRCQNCLKPFVAL---DLNEQAVPSGANQ 229
Query: 37 RTVGLF 20
R+ G++
Sbjct: 230 RSAGVW 235
>04_04_0090 -
22747049-22747282,22747438-22747847,22748562-22748757,
22749511-22749583,22749673-22749753,22749855-22749940,
22750050-22750126,22750313-22750409,22751025-22752020,
22752882-22752926
Length = 764
Score = 26.6 bits (56), Expect = 7.8
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -2
Query: 352 GLG*AFGCTQSNWKGLPSI--GVFSCVFAGDAMR*VFLKLITLELATPAGVSAKHWYW 185
GLG F TQS L G F+ A A+ F+ + LE + P V A+HWYW
Sbjct: 619 GLGLTFVQTQSFLAMLCRFRYGTFAYYAAWVAVMTAFIAVFLLE-SMPT-VWARHWYW 674
>03_01_0117 +
925850-925988,926075-926494,926607-926785,927568-927686,
928180-928498
Length = 391
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 232 LELATPAGVSAKHWYWPSSDACGLRNTRDPSSLRRAALCSCQLKDF 95
+E+ P G W P + A R+ DP+ + RAA S + F
Sbjct: 1 MEVDDPRGWDFVDWVGPDASASIFRSLDDPADIVRAAAVSRSWRRF 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,222,188
Number of Sequences: 37544
Number of extensions: 266134
Number of successful extensions: 869
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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