Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_L18
(413 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 41 6e-06
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 38 3e-05
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 32 0.003
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 1.0
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 1.0
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 2.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 9.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 20 9.6
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 40.7 bits (91), Expect = 6e-06
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Frame = +3
Query: 36 LECLIEGNDQGVKYSWQKDGKSFNWQEHNAALR-KDEGSLVFLRP-QASDEGQYQCFAET 209
L+C++ D + W G+ A + D S++ + A G+Y C AE
Sbjct: 603 LQCIVPTGDLPLNIRWSYPGEEMGGSSGVLAKKVADRVSMLMISVITARHAGEYVCTAEN 662
Query: 210 PAGVAS-SRVISFR-KTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPKPLITWKK 371
AG AS S ++ I P +K +G +++C + + +PKP +TWKK
Sbjct: 663 AAGTASHSTTLTVNVPPRWILEPT---DKAFAQGSDARVEC-KADGFPKPQVTWKK 714
Score = 34.3 bits (75), Expect = 6e-04
Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 8/117 (6%)
Frame = +3
Query: 12 FKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRK--DEGSLVFLRPQASDEG 185
F V+EC GN Q + DG + LR+ G+LVF +A D
Sbjct: 15 FSNGTGAVVECQARGNPQPDIIWVRADGSAVG---DVPGLRQVLPNGNLVFPPFRAEDYR 71
Query: 186 Q------YQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPN 338
Q Y C A +PAG SR ++ R +++ I G L CV P+
Sbjct: 72 QEVHAQVYSCLARSPAGSVHSRDVNVRAVVAQYYDTDVNKEYAIRGNSAILKCVVPS 128
Score = 30.7 bits (66), Expect = 0.007
Identities = 34/118 (28%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Frame = +3
Query: 27 PTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCFAE 206
P C + GN SW KDGK +E A LR + + D+G YQCF
Sbjct: 324 PATFTCNVRGNPIKT-VSWLKDGKPLGLEE--AVLRIES-------VKKEDKGMYQCFVR 373
Query: 207 TPAGVASSRVISFRKTYLIASPAKTH----EKTPIEGRPFQLDCVQPNAYPKPLITWK 368
S++ + K P + E+T G L CV + P P ITW+
Sbjct: 374 NDQ--ESAQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCV-ASGNPTPEITWE 428
Score = 29.5 bits (63), Expect = 0.016
Identities = 19/84 (22%), Positives = 32/84 (38%)
Frame = +3
Query: 120 NAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPI 299
N +R+ G+L+ + D G+Y C G S + T + + + +T
Sbjct: 262 NERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETV-LTVTAPLGAEIEPSTQTID 320
Query: 300 EGRPFQLDCVQPNAYPKPLITWKK 371
GRP C P ++W K
Sbjct: 321 FGRPATFTC-NVRGNPIKTVSWLK 343
Score = 28.3 bits (60), Expect = 0.036
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 5/110 (4%)
Frame = +3
Query: 12 FKENNPTVLECLIEGNDQGVKYSWQK-----DGKSFNWQEHNAALRKDEGSLVFLRPQAS 176
F + + +EC +G + + +W+K G + + N + ++G+L Q +
Sbjct: 690 FAQGSDARVECKADGFPKP-QVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKT 748
Query: 177 DEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDC 326
+EG Y C A G S VI K +T G P L C
Sbjct: 749 NEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQC 798
Score = 25.8 bits (54), Expect = 0.19
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 141 EGSLVFLRPQASDEGQYQCFAETPAG 218
EGSL +D G+Y C+ E G
Sbjct: 1328 EGSLFIKEVDRTDAGEYSCYVENTFG 1353
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 38.3 bits (85), Expect = 3e-05
Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 4/118 (3%)
Frame = +3
Query: 30 TVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDE-GSLVFLRPQASD-EGQYQCFA 203
T L C + D + SW KDG++ E D+ S++ + + D G Y C A
Sbjct: 628 TTLTCSVTRGDLPLSISWLKDGRAMGPSERVHVTNMDQYNSILMIEHLSPDHNGNYSCVA 687
Query: 204 ETPAGVAS--SRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPKPLITWKK 371
A S R++ I P + + L C Q P P I WKK
Sbjct: 688 RNLAAEVSHTQRLVVHVPPRWIVEPTDVSVE---RNKHVALHC-QAQGVPTPTIVWKK 741
Score = 26.2 bits (55), Expect = 0.15
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 177 DEGQYQCFAETPAG--VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPK 350
D G+Y C AE AG ++R+ + Y+ P + T + G +L C YP
Sbjct: 493 DGGEYSCMAENRAGKVTHAARLNVYGLPYIRLIP----KVTAVAGETLRLKC-PVAGYPI 547
Query: 351 PLITWKK 371
I W++
Sbjct: 548 EEIKWER 554
Score = 24.6 bits (51), Expect = 0.45
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 177 DEGQYQCFAETPAGVASSRV 236
D G Y+C A P G AS+ +
Sbjct: 304 DNGIYRCSASNPGGEASAEI 323
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 31.9 bits (69), Expect = 0.003
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Frame = +3
Query: 42 CLIEGNDQGVKYSWQKDGKS-F----NWQEHNAALRKDEGSLVFLRPQASD-EGQYQCFA 203
C + D + SW KDG+S F N N + SL+ + A++ G Y C A
Sbjct: 632 CGVAAGDPPLTISWLKDGQSPFPLPPNLASANISQLDPYSSLLSITNLAAEHSGDYTCVA 691
Query: 204 ETPAGVASSRVISFRKTYLIASPAKTHEKTPI---EGRPFQLDCVQPNAYPKPLITWKK 371
PA + V K + P E T + + L C Q P P I WKK
Sbjct: 692 ANPA----AEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHC-QAQGVPTPTIVWKK 745
Score = 26.2 bits (55), Expect = 0.15
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 177 DEGQYQCFAETPAG--VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPK 350
D G+Y C AE AG ++R+ + Y+ P + T + G +L C YP
Sbjct: 493 DGGEYSCMAENRAGKVTHAARLNVYGLPYIRLIP----KVTAVAGETLRLKC-PVAGYPI 547
Query: 351 PLITWKK 371
I W++
Sbjct: 548 EEIKWER 554
Score = 24.6 bits (51), Expect = 0.45
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 177 DEGQYQCFAETPAGVASSRV 236
D G Y+C A P G AS+ +
Sbjct: 304 DNGIYRCSASNPGGEASAEI 323
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 1.0
Identities = 12/54 (22%), Positives = 21/54 (38%)
Frame = +3
Query: 81 WQKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVIS 242
W+++G ++GSL + Q G Y C A V + V++
Sbjct: 344 WRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHAVRNQDVVQTHVLT 397
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.4 bits (48), Expect = 1.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 192 GIGPRQTLAVSGIPGILHLCG 130
GIGP++ L GIP ++ L G
Sbjct: 334 GIGPKEHLRSLGIPVVVDLPG 354
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 2.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 229 ELATPAGVSAKHWYWPSSDACGLRNTRDPSSLRRAALC 116
EL+ P ++ + SSD C R + P+ ++ LC
Sbjct: 154 ELSQPGSLNG----YGSSDGCDARKKKGPTPRQQEELC 187
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.2 bits (40), Expect = 9.6
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +2
Query: 8 PLQGEQPNGPRMSHRRKRSGSQVLLAKGWEIFQLAGA*RCSPQR*RIPG 154
P++ + + S ++++ + V G I Q A + SPQ+ +PG
Sbjct: 969 PVKVQSQQQSQQSQQQQQQQTIVTNQAGKSILQTANIKQQSPQQHVLPG 1017
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 323 VQLERPAFDWRFLVCLRW 270
V L P +DW + L+W
Sbjct: 255 VPLSHPTYDWFEKLELKW 272
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,438
Number of Sequences: 438
Number of extensions: 2579
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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