Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_L15
(584 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69043-1|CAA93157.1| 173|Homo sapiens translocon-associated pro... 111 2e-24
Z68129-2|CAA92215.1| 173|Homo sapiens translocon-associated pro... 111 2e-24
X90583-1|CAA62211.1| 173|Homo sapiens protein ( H.sapiens mRNA ... 111 2e-24
BT007192-1|AAP35856.1| 173|Homo sapiens signal sequence recepto... 111 2e-24
BC003371-1|AAH03371.1| 173|Homo sapiens signal sequence recepto... 111 2e-24
AK026711-1|BAB15535.1| 180|Homo sapiens protein ( Homo sapiens ... 30 5.2
BC020107-1|AAH20107.1| 1156|Homo sapiens nucleoporin 133kDa prot... 29 9.1
AL160004-2|CAI19048.1| 1156|Homo sapiens nucleoporin 133kDa prot... 29 9.1
AL160004-1|CAI19047.1| 1068|Homo sapiens nucleoporin 133kDa prot... 29 9.1
AL139252-2|CAI22354.1| 1156|Homo sapiens nucleoporin 133kDa prot... 29 9.1
AL139252-1|CAI22353.1| 1068|Homo sapiens nucleoporin 133kDa prot... 29 9.1
AL121990-3|CAI22011.1| 1156|Homo sapiens nucleoporin 133kDa prot... 29 9.1
AL121990-2|CAI22010.1| 1068|Homo sapiens nucleoporin 133kDa prot... 29 9.1
AK022572-1|BAB14106.1| 588|Homo sapiens protein ( Homo sapiens ... 29 9.1
AK001754-1|BAA91885.1| 775|Homo sapiens protein ( Homo sapiens ... 29 9.1
AK001676-1|BAA91829.1| 1156|Homo sapiens protein ( Homo sapiens ... 29 9.1
>Z69043-1|CAA93157.1| 173|Homo sapiens translocon-associated
protein delta subunit precursor protein.
Length = 173
Score = 111 bits (266), Expect = 2e-24
Identities = 54/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Frame = +2
Query: 125 MNKIPIVILLTFAYISRGIAESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPE 304
M + + LL + +SR AE+C P++ + +T+ DA + T+ +I E SL C N + +
Sbjct: 4 MASLGALALLLLSSLSRCSAEACLEPQITPSYYTTSDAVISTETVFIVEISLTCKNRV-Q 62
Query: 305 NYALYAEVDEKPLTAARVGE-NKYQVSWTEEPAKARSGVHEINILDEEGWASLRRARR-S 478
N ALYA+V K R + +YQVSW+ + A +G +E+ DEE ++ LR+A+R +
Sbjct: 63 NMALYADVGGKQFPVTRGQDVGRYQVSWSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNN 122
Query: 479 DPTATVAPLLAIQLHHPGSYSGPWVNSEVLATVM 580
+ + + PL + + H G+++GPWV++EVLA +
Sbjct: 123 EDISIIPPLFTVSVDHRGTWNGPWVSTEVLAAAI 156
>Z68129-2|CAA92215.1| 173|Homo sapiens translocon-associated
protein delta subunit precursor protein.
Length = 173
Score = 111 bits (266), Expect = 2e-24
Identities = 54/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Frame = +2
Query: 125 MNKIPIVILLTFAYISRGIAESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPE 304
M + + LL + +SR AE+C P++ + +T+ DA + T+ +I E SL C N + +
Sbjct: 4 MASLGALALLLLSSLSRCSAEACLEPQITPSYYTTSDAVISTETVFIVEISLTCKNRV-Q 62
Query: 305 NYALYAEVDEKPLTAARVGE-NKYQVSWTEEPAKARSGVHEINILDEEGWASLRRARR-S 478
N ALYA+V K R + +YQVSW+ + A +G +E+ DEE ++ LR+A+R +
Sbjct: 63 NMALYADVGGKQFPVTRGQDVGRYQVSWSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNN 122
Query: 479 DPTATVAPLLAIQLHHPGSYSGPWVNSEVLATVM 580
+ + + PL + + H G+++GPWV++EVLA +
Sbjct: 123 EDISIIPPLFTVSVDHRGTWNGPWVSTEVLAAAI 156
>X90583-1|CAA62211.1| 173|Homo sapiens protein ( H.sapiens mRNA for
rat translocon-associated protein delta homolog. ).
Length = 173
Score = 111 bits (266), Expect = 2e-24
Identities = 54/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Frame = +2
Query: 125 MNKIPIVILLTFAYISRGIAESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPE 304
M + + LL + +SR AE+C P++ + +T+ DA + T+ +I E SL C N + +
Sbjct: 4 MASLGALALLLLSSLSRCSAEACLEPQITPSYYTTSDAVISTETVFIVEISLTCKNRV-Q 62
Query: 305 NYALYAEVDEKPLTAARVGE-NKYQVSWTEEPAKARSGVHEINILDEEGWASLRRARR-S 478
N ALYA+V K R + +YQVSW+ + A +G +E+ DEE ++ LR+A+R +
Sbjct: 63 NMALYADVGGKQFPVTRGQDVGRYQVSWSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNN 122
Query: 479 DPTATVAPLLAIQLHHPGSYSGPWVNSEVLATVM 580
+ + + PL + + H G+++GPWV++EVLA +
Sbjct: 123 EDISIIPPLFTVSVDHRGTWNGPWVSTEVLAAAI 156
>BT007192-1|AAP35856.1| 173|Homo sapiens signal sequence receptor,
delta (translocon-associated protein delta) protein.
Length = 173
Score = 111 bits (266), Expect = 2e-24
Identities = 54/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Frame = +2
Query: 125 MNKIPIVILLTFAYISRGIAESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPE 304
M + + LL + +SR AE+C P++ + +T+ DA + T+ +I E SL C N + +
Sbjct: 4 MASLGALALLLLSSLSRCSAEACLEPQITPSYYTTSDAVISTETVFIVEISLTCKNRV-Q 62
Query: 305 NYALYAEVDEKPLTAARVGE-NKYQVSWTEEPAKARSGVHEINILDEEGWASLRRARR-S 478
N ALYA+V K R + +YQVSW+ + A +G +E+ DEE ++ LR+A+R +
Sbjct: 63 NMALYADVGGKQFPVTRGQDVGRYQVSWSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNN 122
Query: 479 DPTATVAPLLAIQLHHPGSYSGPWVNSEVLATVM 580
+ + + PL + + H G+++GPWV++EVLA +
Sbjct: 123 EDISIIPPLFTVSVDHRGTWNGPWVSTEVLAAAI 156
>BC003371-1|AAH03371.1| 173|Homo sapiens signal sequence receptor,
delta (translocon-associated protein delta) protein.
Length = 173
Score = 111 bits (266), Expect = 2e-24
Identities = 54/154 (35%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Frame = +2
Query: 125 MNKIPIVILLTFAYISRGIAESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPE 304
M + + LL + +SR AE+C P++ + +T+ DA + T+ +I E SL C N + +
Sbjct: 4 MASLGALALLLLSSLSRCSAEACLEPQITPSYYTTSDAVISTETVFIVEISLTCKNRV-Q 62
Query: 305 NYALYAEVDEKPLTAARVGE-NKYQVSWTEEPAKARSGVHEINILDEEGWASLRRARR-S 478
N ALYA+V K R + +YQVSW+ + A +G +E+ DEE ++ LR+A+R +
Sbjct: 63 NMALYADVGGKQFPVTRGQDVGRYQVSWSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNN 122
Query: 479 DPTATVAPLLAIQLHHPGSYSGPWVNSEVLATVM 580
+ + + PL + + H G+++GPWV++EVLA +
Sbjct: 123 EDISIIPPLFTVSVDHRGTWNGPWVSTEVLAAAI 156
>AK026711-1|BAB15535.1| 180|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23058 fis, clone LNG03818. ).
Length = 180
Score = 30.3 bits (65), Expect = 5.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 488 QSGRSDERGGVTPNPPHPGC*FHELRSGP 402
+SG E+GG P+PP P +H +GP
Sbjct: 73 ESGLHPEQGGAGPSPPSPSPPWHTREAGP 101
>BC020107-1|AAH20107.1| 1156|Homo sapiens nucleoporin 133kDa
protein.
Length = 1156
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 153 SKITIGILFILKRVIKYL*HYKLNSHTYYRRQRS*LENSKKY 28
+++ I + ILK +++ HY+ N ++ YRR+ S LE +Y
Sbjct: 722 AEVVINVNNILKDMLQAASHYRQNRNSLYRREES-LEKEPEY 762
>AL160004-2|CAI19048.1| 1156|Homo sapiens nucleoporin 133kDa
protein.
Length = 1156
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 153 SKITIGILFILKRVIKYL*HYKLNSHTYYRRQRS*LENSKKY 28
+++ I + ILK +++ HY+ N ++ YRR+ S LE +Y
Sbjct: 722 AEVVINVNNILKDMLQAASHYRQNRNSLYRREES-LEKEPEY 762
>AL160004-1|CAI19047.1| 1068|Homo sapiens nucleoporin 133kDa
protein.
Length = 1068
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 153 SKITIGILFILKRVIKYL*HYKLNSHTYYRRQRS*LENSKKY 28
+++ I + ILK +++ HY+ N ++ YRR+ S LE +Y
Sbjct: 722 AEVVINVNNILKDMLQAASHYRQNRNSLYRREES-LEKEPEY 762
>AL139252-2|CAI22354.1| 1156|Homo sapiens nucleoporin 133kDa
protein.
Length = 1156
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 153 SKITIGILFILKRVIKYL*HYKLNSHTYYRRQRS*LENSKKY 28
+++ I + ILK +++ HY+ N ++ YRR+ S LE +Y
Sbjct: 722 AEVVINVNNILKDMLQAASHYRQNRNSLYRREES-LEKEPEY 762
>AL139252-1|CAI22353.1| 1068|Homo sapiens nucleoporin 133kDa
protein.
Length = 1068
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 153 SKITIGILFILKRVIKYL*HYKLNSHTYYRRQRS*LENSKKY 28
+++ I + ILK +++ HY+ N ++ YRR+ S LE +Y
Sbjct: 722 AEVVINVNNILKDMLQAASHYRQNRNSLYRREES-LEKEPEY 762
>AL121990-3|CAI22011.1| 1156|Homo sapiens nucleoporin 133kDa
protein.
Length = 1156
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 153 SKITIGILFILKRVIKYL*HYKLNSHTYYRRQRS*LENSKKY 28
+++ I + ILK +++ HY+ N ++ YRR+ S LE +Y
Sbjct: 722 AEVVINVNNILKDMLQAASHYRQNRNSLYRREES-LEKEPEY 762
>AL121990-2|CAI22010.1| 1068|Homo sapiens nucleoporin 133kDa
protein.
Length = 1068
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 153 SKITIGILFILKRVIKYL*HYKLNSHTYYRRQRS*LENSKKY 28
+++ I + ILK +++ HY+ N ++ YRR+ S LE +Y
Sbjct: 722 AEVVINVNNILKDMLQAASHYRQNRNSLYRREES-LEKEPEY 762
>AK022572-1|BAB14106.1| 588|Homo sapiens protein ( Homo sapiens
cDNA FLJ12510 fis, clone NT2RM2001723. ).
Length = 588
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 153 SKITIGILFILKRVIKYL*HYKLNSHTYYRRQRS*LENSKKY 28
+++ I + ILK +++ HY+ N ++ YRR+ S LE +Y
Sbjct: 154 AEVVINVNNILKDMLQAASHYRQNRNSLYRREES-LEKEPEY 194
>AK001754-1|BAA91885.1| 775|Homo sapiens protein ( Homo sapiens
cDNA FLJ10892 fis, clone NT2RP4002298. ).
Length = 775
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 153 SKITIGILFILKRVIKYL*HYKLNSHTYYRRQRS*LENSKKY 28
+++ I + ILK +++ HY+ N ++ YRR+ S LE +Y
Sbjct: 341 AEVVINVNNILKDMLQAASHYRQNRNSLYRREES-LEKEPEY 381
>AK001676-1|BAA91829.1| 1156|Homo sapiens protein ( Homo sapiens
cDNA FLJ10814 fis, clone NT2RP4000984. ).
Length = 1156
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 153 SKITIGILFILKRVIKYL*HYKLNSHTYYRRQRS*LENSKKY 28
+++ I + ILK +++ HY+ N ++ YRR+ S LE +Y
Sbjct: 722 AEVVINVNNILKDMLQAASHYRQNRNSLYRREES-LEKEPEY 762
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,954,954
Number of Sequences: 237096
Number of extensions: 1848867
Number of successful extensions: 12526
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12516
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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