Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_L13
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain bin... 191 2e-48
CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein. 191 2e-48
BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive photo... 191 2e-48
BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive photo... 191 2e-48
BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive photo... 191 2e-48
U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog prot... 180 5e-45
AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subuni... 122 1e-27
U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated... 60 5e-09
BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome, ma... 60 5e-09
AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein. 60 5e-09
X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein. 37 0.066
S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha cha... 37 0.066
S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein. 37 0.066
BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 37 0.066
BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing ... 33 1.1
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 30 7.6
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 30 7.6
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 30 7.6
>U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain
binding protein protein.
Length = 334
Score = 191 bits (465), Expect = 2e-48
Identities = 91/127 (71%), Positives = 105/127 (82%)
Frame = +2
Query: 164 ADSQSNIAQKTWVMANNMEIVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 343
A S S +AQKTW +ANNM+ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 344 LLKTVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTSIY 523
LLK VMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM +
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 524 *SSKTGG 544
++K G
Sbjct: 122 ENAKQVG 128
Score = 76.6 bits (180), Expect = 7e-14
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 516 AYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVS 620
AYIE AKQVG ENAIGWYHSHPGYGCWLSGIDVS
Sbjct: 119 AYIENAKQVGHLENAIGWYHSHPGYGCWLSGIDVS 153
>CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein.
Length = 334
Score = 191 bits (465), Expect = 2e-48
Identities = 91/127 (71%), Positives = 105/127 (82%)
Frame = +2
Query: 164 ADSQSNIAQKTWVMANNMEIVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 343
A S S +AQKTW +ANNM+ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 344 LLKTVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTSIY 523
LLK VMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM +
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 524 *SSKTGG 544
++K G
Sbjct: 122 ENAKQVG 128
Score = 78.6 bits (185), Expect = 2e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 516 AYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVS 620
AYIE AKQVGR ENAIGWYHSHPGYGCWLSGIDVS
Sbjct: 119 AYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVS 153
>BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 191 bits (465), Expect = 2e-48
Identities = 91/127 (71%), Positives = 105/127 (82%)
Frame = +2
Query: 164 ADSQSNIAQKTWVMANNMEIVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 343
A S S +AQKTW +ANNM+ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 344 LLKTVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTSIY 523
LLK VMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM +
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 524 *SSKTGG 544
++K G
Sbjct: 122 ENAKQVG 128
Score = 78.6 bits (185), Expect = 2e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 516 AYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVS 620
AYIE AKQVGR ENAIGWYHSHPGYGCWLSGIDVS
Sbjct: 119 AYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVS 153
>BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 191 bits (465), Expect = 2e-48
Identities = 91/127 (71%), Positives = 105/127 (82%)
Frame = +2
Query: 164 ADSQSNIAQKTWVMANNMEIVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 343
A S S +AQKTW +ANNM+ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 344 LLKTVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTSIY 523
LLK VMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM +
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 524 *SSKTGG 544
++K G
Sbjct: 122 ENAKQVG 128
Score = 78.6 bits (185), Expect = 2e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 516 AYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVS 620
AYIE AKQVGR ENAIGWYHSHPGYGCWLSGIDVS
Sbjct: 119 AYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVS 153
>BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 191 bits (465), Expect = 2e-48
Identities = 91/127 (71%), Positives = 105/127 (82%)
Frame = +2
Query: 164 ADSQSNIAQKTWVMANNMEIVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 343
A S S +AQKTW +ANNM+ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 344 LLKTVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTSIY 523
LLK VMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM +
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 524 *SSKTGG 544
++K G
Sbjct: 122 ENAKQVG 128
Score = 78.6 bits (185), Expect = 2e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 516 AYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVS 620
AYIE AKQVGR ENAIGWYHSHPGYGCWLSGIDVS
Sbjct: 119 AYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVS 153
>U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog
protein.
Length = 334
Score = 180 bits (437), Expect = 5e-45
Identities = 88/127 (69%), Positives = 102/127 (80%)
Frame = +2
Query: 164 ADSQSNIAQKTWVMANNMEIVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 343
A S S +AQKTW +ANNM+ ++D+IY+YDKKQQQ+ILAA KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAANLGTKDHHYFKYCKISALA 61
Query: 344 LLKTVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTSIY 523
LLK VMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM +
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 524 *SSKTGG 544
++K G
Sbjct: 122 ENAKQVG 128
Score = 78.6 bits (185), Expect = 2e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 516 AYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVS 620
AYIE AKQVGR ENAIGWYHSHPGYGCWLSGIDVS
Sbjct: 119 AYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVS 153
>AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subunit 5
variant protein.
Length = 276
Score = 122 bits (294), Expect = 1e-27
Identities = 60/79 (75%), Positives = 66/79 (83%)
Frame = +2
Query: 308 HFFKDIKISALALLKTVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNA 487
H+FK KISALALLK VMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNA
Sbjct: 19 HYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNA 78
Query: 488 QAQAYEYMTSIY*SSKTGG 544
QA AYEYM + ++K G
Sbjct: 79 QAAAYEYMAAYIENAKQVG 97
Score = 78.6 bits (185), Expect = 2e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 516 AYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVS 620
AYIE AKQVGR ENAIGWYHSHPGYGCWLSGIDVS
Sbjct: 88 AYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVS 122
>U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated
pad1 homolog protein.
Length = 310
Score = 60.5 bits (140), Expect = 5e-09
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +3
Query: 522 IEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVS 620
++ KQ GR E +GWYHSHPG+GCWLSG+D++
Sbjct: 96 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDIN 128
Score = 54.8 bits (126), Expect = 2e-07
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +2
Query: 317 KDIKISALALLKTVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNA 487
+ + IS+LALLK + H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEA 86
>BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 protein.
Length = 310
Score = 60.5 bits (140), Expect = 5e-09
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +3
Query: 522 IEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVS 620
++ KQ GR E +GWYHSHPG+GCWLSG+D++
Sbjct: 96 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDIN 128
Score = 54.8 bits (126), Expect = 2e-07
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +2
Query: 317 KDIKISALALLKTVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNA 487
+ + IS+LALLK + H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEA 86
>AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein.
Length = 154
Score = 60.5 bits (140), Expect = 5e-09
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +3
Query: 522 IEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVS 620
++ KQ GR E +GWYHSHPG+GCWLSG+D++
Sbjct: 96 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDIN 128
Score = 54.8 bits (126), Expect = 2e-07
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +2
Query: 317 KDIKISALALLKTVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNA 487
+ + IS+LALLK + H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEA 86
>X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein.
Length = 291
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDV 136
>S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha
chain-c6.1A fusion protein protein.
Length = 363
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 64 AELTGRPMRVVGWYHSHPHITVWPSHVDV 92
>S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein.
Length = 321
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 113 AELTGRPMRVVGWYHSHPHITVWPSHVDV 141
>BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDV 136
>BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDV 136
>BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 109 AELTGRPMRVVGWYHSHPHITVWPSHVDV 137
>BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDV 136
>BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 226
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 84 AELTGRPMRVVGWYHSHPHITVWPSHVDV 112
>BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDV 136
>BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDV 136
>BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 109 AELTGRPMRVVGWYHSHPHITVWPSHVDV 137
>BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDV 136
>BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDV 136
>BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDV 136
>AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex subunit 36 protein.
Length = 316
Score = 36.7 bits (81), Expect = 0.066
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGIDV 617
A+ GR +GWYHSHP W S +DV
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDV 136
>BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 90
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 531 AKQVGRHENAIGWYHSHPGYGCWLSGI 611
A+ GR +GWYHSHP W S +
Sbjct: 50 AELTGRPMRVVGWYHSHPHITVWPSHV 76
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 323 IKISALALLKTVMH----ARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 490
+ + L LL V H + G V+G+LLG + V +SFA+P + + +
Sbjct: 9 VVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 491 AQAYEYMTSIY 523
++Y+ ++Y
Sbjct: 69 FLDHDYLENMY 79
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 323 IKISALALLKTVMH----ARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 490
+ + L LL V H + G V+G+LLG + V +SFA+P + + +
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 491 AQAYEYMTSIY 523
++Y+ ++Y
Sbjct: 69 FLDHDYLENMY 79
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 323 IKISALALLKTVMH----ARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 490
+ + L LL V H + G V+G+LLG + V +SFA+P + + +
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 491 AQAYEYMTSIY 523
++Y+ ++Y
Sbjct: 69 FLDHDYLENMY 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,358,207
Number of Sequences: 237096
Number of extensions: 1858013
Number of successful extensions: 5397
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5397
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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