Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_L10
         (332 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000051A95B Cluster: PREDICTED: similar to Neosin CG8...    31   6.7  
UniRef50_Q2V328 Cluster: Uncharacterized protein At5g37474.1; n=...    31   6.7  

>UniRef50_UPI000051A95B Cluster: PREDICTED: similar to Neosin
           CG8614-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
           to Neosin CG8614-PA - Apis mellifera
          Length = 645

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = -2

Query: 328 EIFWNSQILT*HHQSL-MRLGEGFLSFRLFFLLEDFLSSTIRGNLSNCGC 182
           EI   +++LT + +S+ MRL +  L+  L F  ED L S + GN+++ GC
Sbjct: 359 EIIVVNKVLTEYAESIEMRLKKIGLTVDLLFPNEDVLLSRVLGNIASRGC 408


>UniRef50_Q2V328 Cluster: Uncharacterized protein At5g37474.1; n=2;
           Arabidopsis thaliana|Rep: Uncharacterized protein
           At5g37474.1 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 80

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 50  CN*SLKNGDLEPSFEHSVPVYSSGGRCC 133
           C    +   L+PSF+  VP  S GG+CC
Sbjct: 39  CKRICRGHGLDPSFQLCVPYSSKGGKCC 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,758,753
Number of Sequences: 1657284
Number of extensions: 4750643
Number of successful extensions: 10337
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10335
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)