Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_L09
         (483 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    25   0.56 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.7  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   2.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   2.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.0  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 24.6 bits (51), Expect = 0.56
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 373 TICSKIRLVHQRPPVTRTSSI 435
           TIC K R++ +R  VTR S I
Sbjct: 342 TICCKTRIIGRRSWVTRESQI 362


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +1

Query: 307  SPPEICQISLMYPTSTLSVAE*TICSKIRLVHQRPPVTRTSSIVTITPWTES 462
            S P  CQ     P + +++    + S+  LV  RPP      I   T +T++
Sbjct: 1168 SAPIHCQTEQDAPEAPIAIKALVMSSESILVSWRPPSQPNGVITQYTVYTKA 1219


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 310 AKAFAVMSWLSLWKRFTLPAAVTL 239
           AK  +V  W S W     P+A T+
Sbjct: 328 AKTISVQQWNSYWGILGFPSAPTI 351


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 310 AKAFAVMSWLSLWKRFTLPAAVTL 239
           AK  +V  W S W     P+A T+
Sbjct: 328 AKTISVQQWNSYWGILGFPSAPTI 351


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 411 AGHTDFINRNDYSLDGKLNLF 473
           A ++ +   +DY+L+ KLN F
Sbjct: 203 ANYSGWYLNHDYNLENKLNYF 223


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,624
Number of Sequences: 438
Number of extensions: 3158
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)