Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_L07
         (393 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   0.62 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   0.62 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   3.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.8  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    20   7.6  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 0.62
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 100 LPYVLAEHVAGVYIPGIY 47
           LP  L EH  G+Y P IY
Sbjct: 473 LPVFLQEHRNGMYRPSIY 490


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 0.62
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 100 LPYVLAEHVAGVYIPGIY 47
           LP  L EH  G+Y P IY
Sbjct: 473 LPVFLQEHRNGMYRPSIY 490


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 383 NELFRFLGSVYI 348
           N+LFRFLG++ I
Sbjct: 313 NDLFRFLGNLRI 324



 Score = 21.0 bits (42), Expect = 4.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 195 RCLSWLCISIDR 230
           +CLSWL +S +R
Sbjct: 394 KCLSWLDLSYNR 405


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +1

Query: 112  LSHTWFLRDDVKRLEEQRSRLSRCPLGSG 198
            LS+ W   DD+  +  +   +    LG G
Sbjct: 2630 LSNQWVSYDDIAEIRRKSRLVKALKLGGG 2658


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 93  YGSHFLPKSYLVSS 134
           YG HF  K+ +V S
Sbjct: 39  YGRHFFKKNLIVGS 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,976
Number of Sequences: 336
Number of extensions: 1841
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)