Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_L07
         (393 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   5.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   7.0  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    22   7.0  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 121 TWFLRDDVKRLEEQRSRLS 177
           TW +RDD   LE   S+L+
Sbjct: 148 TWSMRDDKATLESMGSQLA 166


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 120 YLVSSRRR*KIRRTEKSTITLSAWQR 197
           YL        + R E+  +TL  WQR
Sbjct: 857 YLADPEASRAVIRREERAVTLEVWQR 882


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
 Frame = +1

Query: 76  RAQPIRMEVISCLSHTWF-----LRDDVKR 150
           R +P ++EV+    H+W+     +RD VK+
Sbjct: 309 RPRPDKIEVVPSAGHSWYTLYKTVRDAVKQ 338


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,757
Number of Sequences: 2352
Number of extensions: 7276
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)