Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_L06
         (371 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   1.2  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   4.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.2  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = -2

Query: 61  RTDTRNNLANIFV--CLLEDC 5
           R DT+NNL N +V   L+ DC
Sbjct: 50  RQDTKNNLLNAYVRFKLVTDC 70


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 10/40 (25%), Positives = 15/40 (37%)
 Frame = +3

Query: 111 YIEQYEDQPEQWANSRVRRQAGALTVNSDGTSGAMVKVPI 230
           Y      + E W N+ V R       NS+  + + V   I
Sbjct: 264 YFHSLASRVESWVNTSVIRNYTLFNENSEAAARSFVPFSI 303


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 361 VFVRVAPCPFTLS*ANPA 308
           +FV V PCP+     N A
Sbjct: 228 IFVPVKPCPWICELTNDA 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,633
Number of Sequences: 438
Number of extensions: 2134
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)