Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_L04
         (488 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    26   0.16 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.49 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 363 CMKVHCSAGRVCEINEHGEAICNC 434
           C    C  G VC I++ G  IC+C
Sbjct: 380 CDSNPCQNGGVCRISDGGGYICDC 403


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +2

Query: 191 DVGGASPRGHLRVGAPRERHGGEPGRETIPGG 286
           D G   P   LR G P   +GG P     P G
Sbjct: 46  DPGSCDPSVGLRQGIPPHHYGGPPSGGQPPQG 77


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +3

Query: 207 PRGD---ISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINL 353
           P+GD       E L NG+   L  +R + ++ A  + +   +  + D  IN+
Sbjct: 839 PKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINM 890


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 170 T*APMASTMFLDLGVDRADD 111
           T APM S++   LG+D + D
Sbjct: 756 TTAPMGSSILKRLGIDESVD 775


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 200 GASPRGHLRVGAPRERHGGEP 262
           G +P GH     P   H G+P
Sbjct: 113 GLAPTGHPGAALPFFCHNGDP 133


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 200 GASPRGHLRVGAPRERHGGEP 262
           G +P GH     P   H G+P
Sbjct: 5   GLAPTGHPGAALPFFCHNGDP 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,836
Number of Sequences: 336
Number of extensions: 1913
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)