Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_L04
         (488 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.34 
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     26   0.80 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   1.4  
AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    24   3.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   5.6  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   7.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   7.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   7.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   9.8  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 27.1 bits (57), Expect = 0.34
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 352 RLISLSGASRDSFRISETRALSASWNRLSSRLSAMP 245
           RL++  GASR   R+ E +     W R     +A P
Sbjct: 859 RLLAAPGASRKDIRLEERQGTFQEWQRAWDAAAAAP 894


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 25.8 bits (54), Expect = 0.80
 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -3

Query: 315 SGS-RRHELSQPPGIVSRPGSPPCRSRGAPTRRCP 214
           SGS  R+   QP GI  RPG P     G P  R P
Sbjct: 61  SGSVERNPAIQPVGIFGRPGRPWWSVPGIPPFRPP 95


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = -3

Query: 336 QEHRVTHSGSRRHELSQPPGIVSRPGSP----PCRSRGA 232
           Q+H++ H+G R   +     I   P +P    PC+  G+
Sbjct: 159 QQHQLEHNGGREQMMKNETSIDEVPNAPAPKAPCQPAGS 197


>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +3

Query: 396 CEINEHGEAICNCIKECPYETD 461
           C   +H + +C+ +++CP   D
Sbjct: 26  CRTPDHRDGVCHPVQQCPSVRD 47


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
 Frame = +2

Query: 224 RVGAP----RERHGGEPGRETIPG 283
           R GAP    R+   GEPGR  +PG
Sbjct: 542 RPGAPGLPGRDGEKGEPGRPGLPG 565



 Score = 22.6 bits (46), Expect = 7.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 254 GEPGRETIPG 283
           GEPGR+ IPG
Sbjct: 383 GEPGRDGIPG 392


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 418 SPCSLISQTRPALQCTFMHGSSRLISLSGASRDSFR 311
           S C+  + +  ++ C  + GS      +G SRDS R
Sbjct: 38  STCNAPTDSANSVSCAGVCGSKHHTHCTGLSRDSTR 73


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +3

Query: 393 VCEINEHGEAICNCIKECPYETDSRRKVCTN 485
           +C  N H  A+C+C   C ++       C N
Sbjct: 769 LCSYNTHCFALCHC---CEFDACDCEMTCPN 796


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +2

Query: 176 DYGAADVGGASPRGHLRVGAPR-ERHG-GEPGRETIPG 283
           D G + VG   P+G+  +  P+ ER G G+ G   +PG
Sbjct: 97  DPGLSMVGPPGPKGNPGLRGPKGERGGMGDRGDPGLPG 134


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 136 TSASTVQMTATTRVNTNSLFILTPWLICVV 47
           TS  ++++ +  RVN+ S+ IL    +C V
Sbjct: 409 TSLKSLELKSLKRVNSGSIVILENSDLCFV 438


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,545
Number of Sequences: 2352
Number of extensions: 9444
Number of successful extensions: 29
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)