BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_L04
(488 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071738-1|AAL49360.1| 304|Drosophila melanogaster RH45818p pro... 56 3e-08
AJ133736-1|CAB39319.1| 304|Drosophila melanogaster BM-40 protein. 56 3e-08
AE014297-4005|AAF56632.2| 304|Drosophila melanogaster CG6378-PA... 56 3e-08
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 33 0.16
AY118567-1|AAM49936.1| 971|Drosophila melanogaster LD40170p pro... 31 0.85
AE014134-403|AAN10428.1| 971|Drosophila melanogaster CG9866-PB,... 31 0.85
AE014134-402|AAF51260.1| 971|Drosophila melanogaster CG9866-PA,... 31 0.85
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 31 0.85
BT009990-1|AAQ22459.1| 509|Drosophila melanogaster RE41906p pro... 31 1.1
AJ001519-1|CAA04801.1| 513|Drosophila melanogaster Ptx1 homeodo... 31 1.1
AE014297-4683|AAF57099.3| 509|Drosophila melanogaster CG1447-PA... 31 1.1
AE014297-4682|AAS65234.1| 514|Drosophila melanogaster CG1447-PC... 31 1.1
AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p pro... 29 3.4
AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA... 29 3.4
Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein. 28 6.0
BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p pro... 28 6.0
AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA ... 28 6.0
AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p pro... 28 7.9
AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p pro... 28 7.9
AL024485-3|CAA19681.1| 235|Drosophila melanogaster EG:155E2.5 p... 28 7.9
AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein... 28 7.9
AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein... 28 7.9
AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA... 28 7.9
AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC... 28 7.9
AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB... 28 7.9
AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA... 28 7.9
>AY071738-1|AAL49360.1| 304|Drosophila melanogaster RH45818p
protein.
Length = 304
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +3
Query: 216 DISESEHLENGMAESLDER-RFQEAERAR-VSEILNESRDAPDNEINLDDPCMKVHCSAG 389
D+S+ + E L+E+ + ++ ER ++ L E + N + D C + C AG
Sbjct: 34 DLSDIDENEEEFLRLLEEKNKIKDIERENEIATKLAEVQHNLLNPVVEVDLCETMSCGAG 93
Query: 390 RVCEINEHGEAICNCIKECPYETDSRRKVCTN 485
R+C++++ + C CI ECP E D+RR VCTN
Sbjct: 94 RICQMHDE-KPKCVCIPECPEEVDTRRLVCTN 124
>AJ133736-1|CAB39319.1| 304|Drosophila melanogaster BM-40 protein.
Length = 304
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +3
Query: 216 DISESEHLENGMAESLDER-RFQEAERAR-VSEILNESRDAPDNEINLDDPCMKVHCSAG 389
D+S+ + E L+E+ + ++ ER ++ L E + N + D C + C AG
Sbjct: 34 DLSDIDENEEEFLRLLEEKNKIKDIERENEIATKLAEVQHNLLNPVVEVDLCETMSCGAG 93
Query: 390 RVCEINEHGEAICNCIKECPYETDSRRKVCTN 485
R+C++++ + C CI ECP E D+RR VCTN
Sbjct: 94 RICQMHDE-KPKCVCIPECPEEVDTRRLVCTN 124
>AE014297-4005|AAF56632.2| 304|Drosophila melanogaster CG6378-PA
protein.
Length = 304
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +3
Query: 216 DISESEHLENGMAESLDER-RFQEAERAR-VSEILNESRDAPDNEINLDDPCMKVHCSAG 389
D+S+ + E L+E+ + ++ ER ++ L E + N + D C + C AG
Sbjct: 34 DLSDIDENEEEFLRLLEEKNKIKDIERENEIATKLAEVQHNLLNPVVEVDLCETMSCGAG 93
Query: 390 RVCEINEHGEAICNCIKECPYETDSRRKVCTN 485
R+C++++ + C CI ECP E D+RR VCTN
Sbjct: 94 RICQMHDE-KPKCVCIPECPEEVDTRRLVCTN 124
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 363 CMKVHCSAGRVCEINEHGEAICNC 434
C V C +C+IN G AICNC
Sbjct: 1649 CSNVVCGPNELCKINPAGHAICNC 1672
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 333 PDNEINLDDPCMKVHCSAGRVCEINEHGEAICNCIKE 443
P + LDDPC C A VC ++G+ C+CI E
Sbjct: 16360 PPKPVALDDPCNPSPCGANAVC---QNGQ--CSCIPE 16391
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDS 464
DPC+ C+ G C ++ H IC C TDS
Sbjct: 3912 DPCL-TSCAGGVKCVVSAHRVTICTCPATLTNNTDS 3946
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTN 485
DPC C C N +G+A+C+C+++ S R C +
Sbjct: 17109 DPCQPSPCGPNAQCR-NINGQAVCSCLRDFIGVPPSCRPECVS 17150
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVC 479
+PC C A C ++ G+AIC+C+ E S R C
Sbjct: 20166 NPCQPSPCGANSQCRESQ-GQAICSCLPEFVGTPPSCRPEC 20205
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 351 LDDPCMKVHCSAGRVCEINEHGEAICNCIK 440
+ DPC+ C A C + +G A+C+C++
Sbjct: 12301 VSDPCIPSPCGANSKCRV-ANGLAVCSCME 12329
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 8/58 (13%)
Frame = +3
Query: 333 PDNEINLDDPCMKVHCSAGRVCE------INE-HGEAICNCIKECPYETD-SRRKVCT 482
P + LDDPC C C I E HG+ C EC D SR C+
Sbjct: 15062 PPTPVKLDDPCNPSPCGPNAQCNNGVCTCIPEYHGDPYSGCRPECITSADCSRELACS 15119
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCIK 440
DPC C A +C + +G C+CI+
Sbjct: 9948 DPCYPSPCGANAICRV-RNGAGSCSCIQ 9974
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTN 485
DPC C C N +G+A C C++E + R C +
Sbjct: 20593 DPCQPSPCGPNSQCT-NVNGQAECRCLQEFQGTPPNCRPECVS 20634
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCI 437
DPC C G +C + + A C+C+
Sbjct: 21087 DPCGFTQCGTGAICRADFNHRARCHCL 21113
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCI 437
DPC C +C + H IC+CI
Sbjct: 13638 DPCAADTCGNNAICRVRNH-SPICSCI 13663
>AY118567-1|AAM49936.1| 971|Drosophila melanogaster LD40170p
protein.
Length = 971
Score = 31.1 bits (67), Expect = 0.85
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = -2
Query: 418 SPCSLISQTRPALQCTFMHGSSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFS 239
S CS S + +LQ GSS S S +SR + S +++ S+S ++ SS SA S
Sbjct: 191 SSCSNGSSSSASLQHPAAAGSSSTTSSSSSSR--HKSSSSKSSSSSSSKGSSSTSAGSRS 248
Query: 238 RCSDSEMSPRGSPA 197
R S+ SPA
Sbjct: 249 RSKSSKNRHHSSPA 262
>AE014134-403|AAN10428.1| 971|Drosophila melanogaster CG9866-PB,
isoform B protein.
Length = 971
Score = 31.1 bits (67), Expect = 0.85
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = -2
Query: 418 SPCSLISQTRPALQCTFMHGSSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFS 239
S CS S + +LQ GSS S S +SR + S +++ S+S ++ SS SA S
Sbjct: 191 SSCSNGSSSSASLQHPAAAGSSSTTSSSSSSR--HKSSSSKSSSSSSSKGSSSTSAGSRS 248
Query: 238 RCSDSEMSPRGSPA 197
R S+ SPA
Sbjct: 249 RSKSSKNRHHSSPA 262
>AE014134-402|AAF51260.1| 971|Drosophila melanogaster CG9866-PA,
isoform A protein.
Length = 971
Score = 31.1 bits (67), Expect = 0.85
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = -2
Query: 418 SPCSLISQTRPALQCTFMHGSSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFS 239
S CS S + +LQ GSS S S +SR + S +++ S+S ++ SS SA S
Sbjct: 191 SSCSNGSSSSASLQHPAAAGSSSTTSSSSSSR--HKSSSSKSSSSSSSKGSSSTSAGSRS 248
Query: 238 RCSDSEMSPRGSPA 197
R S+ SPA
Sbjct: 249 RSKSSKNRHHSSPA 262
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 354 DDPCMKVHCSAGRVCEINEHGEAICNCIKE 443
D+PC + +C+ G VC ++E+ C+CI E
Sbjct: 4494 DNPCAR-YCANGGVCHLDEYRLPHCSCIGE 4522
>BT009990-1|AAQ22459.1| 509|Drosophila melanogaster RE41906p
protein.
Length = 509
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 213 GDISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMK 371
GD +S +A SLD + + S I N SRD D ++++ +K
Sbjct: 183 GDFRDSHSSMTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIK 235
>AJ001519-1|CAA04801.1| 513|Drosophila melanogaster Ptx1
homeodomain protein protein.
Length = 513
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 213 GDISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMK 371
GD +S +A SLD + + S I N SRD D ++++ +K
Sbjct: 187 GDFRDSHSSMTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIK 239
>AE014297-4683|AAF57099.3| 509|Drosophila melanogaster CG1447-PA,
isoform A protein.
Length = 509
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 213 GDISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMK 371
GD +S +A SLD + + S I N SRD D ++++ +K
Sbjct: 183 GDFRDSHSSMTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIK 235
>AE014297-4682|AAS65234.1| 514|Drosophila melanogaster CG1447-PC,
isoform C protein.
Length = 514
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 213 GDISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMK 371
GD +S +A SLD + + S I N SRD D ++++ +K
Sbjct: 188 GDFRDSHSSMTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIK 240
>AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p
protein.
Length = 1071
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +3
Query: 330 APDNEINLDDPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSR 467
+P+ + PC + C+ VC + G +CI C DS+
Sbjct: 577 SPEEFQGITSPCAQKPCNGSEVCILQRGGNQGYSCIPGCNLGQDSK 622
>AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA
protein.
Length = 1071
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +3
Query: 330 APDNEINLDDPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSR 467
+P+ + PC + C+ VC + G +CI C DS+
Sbjct: 577 SPEEFQGITSPCAQKPCNGSEVCILQRGGNQGYSCIPGCNLGQDSK 622
>Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.
Length = 1191
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 252 AESLDERRFQEAERARVSEILNESRDAPDNEINLDD 359
A+ + E++ Q+ E ++ + LN+SRD +N N+DD
Sbjct: 29 AQDIGEQKQQQMED-QLEDQLNDSRDPQNNNNNIDD 63
>BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p
protein.
Length = 1191
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 252 AESLDERRFQEAERARVSEILNESRDAPDNEINLDD 359
A+ + E++ Q+ E ++ + LN+SRD +N N+DD
Sbjct: 29 AQDIGEQKQQQMED-QLEDQLNDSRDPQNNNNNIDD 63
>AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA
protein.
Length = 1191
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 252 AESLDERRFQEAERARVSEILNESRDAPDNEINLDD 359
A+ + E++ Q+ E ++ + LN+SRD +N N+DD
Sbjct: 29 AQDIGEQKQQQMED-QLEDQLNDSRDPQNNNNNIDD 63
>AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p
protein.
Length = 607
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Frame = +2
Query: 209 PRGHLRVGA----PRERHGGEPGRETIP 280
PRGH R GA P E HG GR T P
Sbjct: 299 PRGHYRSGAPPPPPSESHGRIHGRPTTP 326
>AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p protein.
Length = 1422
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/73 (27%), Positives = 25/73 (34%)
Frame = +2
Query: 47 NHAYKPGGQDEEAVSVDPXXXXXXXXXXXXPKTSSTPSALTYDDYGAADVGGASPRGHLR 226
N Y P GQ P P SS S+ YG++ G++PR H
Sbjct: 1221 NTPYTPSGQTPFMTPYTPHASQTPRYGHNVPSPSSQSSSSQRHHYGSSSGTGSTPRYHDM 1280
Query: 227 VGAPRERHGGEPG 265
G GG G
Sbjct: 1281 GGGGGGGVGGGGG 1293
>AL024485-3|CAA19681.1| 235|Drosophila melanogaster EG:155E2.5
protein.
Length = 235
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 201 GLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNESR 326
G PR S +E+ M E+ ER+ Q+ +R +V ++ S+
Sbjct: 173 GAPRDRTSPQFAIESAMPETPGERKEQDRDREQVGDVARPSQ 214
>AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein
protein.
Length = 1827
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/73 (27%), Positives = 25/73 (34%)
Frame = +2
Query: 47 NHAYKPGGQDEEAVSVDPXXXXXXXXXXXXPKTSSTPSALTYDDYGAADVGGASPRGHLR 226
N Y P GQ P P SS S+ YG++ G++PR H
Sbjct: 1626 NTPYTPSGQTPFMTPYTPHASQTPRYGHNVPSPSSQSSSSQRHHYGSSSGTGSTPRYHDM 1685
Query: 227 VGAPRERHGGEPG 265
G GG G
Sbjct: 1686 GGGGGGGVGGGGG 1698
>AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein
protein.
Length = 1831
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/73 (27%), Positives = 25/73 (34%)
Frame = +2
Query: 47 NHAYKPGGQDEEAVSVDPXXXXXXXXXXXXPKTSSTPSALTYDDYGAADVGGASPRGHLR 226
N Y P GQ P P SS S+ YG++ G++PR H
Sbjct: 1630 NTPYTPSGQTPFMTPYTPHASQTPRYGHNVPSPSSQSSSSQRHHYGSSSGTGSTPRYHDM 1689
Query: 227 VGAPRERHGGEPG 265
G GG G
Sbjct: 1690 GGGGGGGVGGGGG 1702
>AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA
protein.
Length = 1831
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/73 (27%), Positives = 25/73 (34%)
Frame = +2
Query: 47 NHAYKPGGQDEEAVSVDPXXXXXXXXXXXXPKTSSTPSALTYDDYGAADVGGASPRGHLR 226
N Y P GQ P P SS S+ YG++ G++PR H
Sbjct: 1630 NTPYTPSGQTPFMTPYTPHASQTPRYGHNVPSPSSQSSSSQRHHYGSSSGTGSTPRYHDM 1689
Query: 227 VGAPRERHGGEPG 265
G GG G
Sbjct: 1690 GGGGGGGVGGGGG 1702
>AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC,
isoform C protein.
Length = 567
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Frame = +2
Query: 209 PRGHLRVGA----PRERHGGEPGRETIP 280
PRGH R GA P E HG GR T P
Sbjct: 259 PRGHYRSGAPPPPPSESHGRIHGRPTTP 286
>AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB,
isoform B protein.
Length = 607
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Frame = +2
Query: 209 PRGHLRVGA----PRERHGGEPGRETIP 280
PRGH R GA P E HG GR T P
Sbjct: 299 PRGHYRSGAPPPPPSESHGRIHGRPTTP 326
>AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA,
isoform A protein.
Length = 607
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Frame = +2
Query: 209 PRGHLRVGA----PRERHGGEPGRETIP 280
PRGH R GA P E HG GR T P
Sbjct: 299 PRGHYRSGAPPPPPSESHGRIHGRPTTP 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,223,758
Number of Sequences: 53049
Number of extensions: 435920
Number of successful extensions: 2431
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2423
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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