Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_L04
(488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 42 2e-04
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 42 2e-04
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 32 0.26
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 32 0.26
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 31 0.45
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 31 0.45
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 28 3.2
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 28 3.2
Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 27 5.5
Z82265-3|CAB05173.1| 471|Caenorhabditis elegans Hypothetical pr... 27 7.3
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 27 7.3
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 27 7.3
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 27 7.3
U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical ... 27 7.3
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z34799-3|CAA84316.3| 539|Caenorhabditis elegans Hypothetical pr... 27 9.7
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 27 9.7
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 27 9.7
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 27 9.7
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 27 9.7
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTN 485
+PC C G+ C + + GE C CI +CP + D KVC N
Sbjct: 51 NPCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCAN 94
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTN 485
+PC C G+ C + + GE C CI +CP + D KVC N
Sbjct: 51 NPCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCAN 94
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 369 KVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVC 479
K C C + E+ +A C C +CP YE + ++VC
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVC 552
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCIKEC 446
DPC C G+ C++ C C ++C
Sbjct: 294 DPCHGHKCPNGQTCQLGVDRRPECKCSEQC 323
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 369 KVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVC 479
K C C + E+ +A C C +CP YE + ++VC
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVC 560
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNCIKEC 446
DPC C G+ C++ C C ++C
Sbjct: 302 DPCHGHKCPNGQTCQLGVDRRPECKCSEQC 331
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 31.1 bits (67), Expect = 0.45
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 376 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQT 486
T APA + S S K A++S ++ KPT+ + ++T
Sbjct: 96 TTAPAAKIASASDSKKPASSSSTISVKPTVRQKTSET 132
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 31.1 bits (67), Expect = 0.45
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 376 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQT 486
T APA + S S K A++S ++ KPT+ + ++T
Sbjct: 124 TTAPAAKIASASDSKKPASSSSTISVKPTVRQKTSET 160
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 378 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVC 479
CS G C G +C C + Y S K C
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTC 248
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 29 WQEFLQNHAYKPGGQDEEAVSVDP 100
WQ + H Y PGG DEE + P
Sbjct: 41 WQRIVTKHTY-PGGVDEETIESHP 63
>Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical
protein F22G12.7 protein.
Length = 447
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 225 ESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMKVHCS 383
E EHLEN + +S + R ++E A +SE+ + + + + +++ CS
Sbjct: 48 EKEHLENSIKKSKNMR--NQSEEAYLSELKRQGLEKHAANVKHQETMLRMSCS 98
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 27.5 bits (58), Expect = 5.5
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 216 DISESEHLENGMAESLDERRFQEAERARVSEI---LNESRDAPDNEI-NLDDPCMKVHCS 383
+I +E NG+ +++ RF+ +RV E+ L E R EI +L++
Sbjct: 472 NIKNAEEKVNGLEAEVEKLRFEATNNSRVVELEQQLEEFRSLMIKEISDLENQLEAAKLE 531
Query: 384 AGRVCEINEHGEAICNCIKECPYE 455
+G E N EA I+E E
Sbjct: 532 SGSTSEPNAQLEASQATIQELTSE 555
>Z82265-3|CAB05173.1| 471|Caenorhabditis elegans Hypothetical
protein F02H6.5 protein.
Length = 471
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Frame = +2
Query: 182 GAADVGGAS------PRGHLRVGAPRERHGGEPGRETIPGG 286
GA +G AS PRG + + PRE H +PG + GG
Sbjct: 20 GAGGLGAASKFARKLPRGSVGIIEPREDHYYQPGFTLVGGG 60
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 487 KFVHTLRLESVSYGHSLMQLQIASPCSLISQTRPALQCTFMHGSSRLISLSGASRD 320
+F+ RLES++ G+ + +SP S + T P +Q F H + S S +
Sbjct: 18 RFIEQKRLESLTTGNGM-----SSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSME 68
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 487 KFVHTLRLESVSYGHSLMQLQIASPCSLISQTRPALQCTFMHGSSRLISLSGASRD 320
+F+ RLES++ G+ + +SP S + T P +Q F H + S S +
Sbjct: 18 RFIEQKRLESLTTGNGM-----SSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSME 68
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/50 (26%), Positives = 18/50 (36%)
Frame = +3
Query: 285 AERARVSEILNESRDAPDNEINLDDPCMKVHCSAGRVCEINEHGEAICNC 434
A + E N S N C + C G C+++ GE C C
Sbjct: 343 ATTCQCPEGFNGSNCEISNSYRSHPTCSDIRCLNGGSCKLDAEGEPFCVC 392
>U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical
protein C30G12.4 protein.
Length = 258
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 373 TFMHGSSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFSRCSDS 224
T++H S+ +S GASR+S AL + N + +S RC D+
Sbjct: 6 TYIHTSAVRLSALGASRESTFFKSRTALIHTVNVANFHVSRQNCRRCLDA 55
>AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical
protein T22B11.1 protein.
Length = 472
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 246 GMAESLDERRFQEAERARVSEILNESRDAPDNEINLDD 359
G +E +DE ++ ARVSEI + ++ + NLDD
Sbjct: 105 GYSEQIDEFLLNPSQFARVSEIWQDVQNTKNFIENLDD 142
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 26.6 bits (56), Expect = 9.7
Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Frame = +2
Query: 65 GGQDEEAVSVDPXXXXXXXXXXXXPKTSSTPSALTYDDYGAADVGGASPRG------HLR 226
GG +E P PKT+ S D +GA+ G G
Sbjct: 1419 GGDSDEEAEKKPSTSKKPSPKKAAPKTAEPKSKAVTDFFGASKKNGKKAAGSDDEDDESF 1478
Query: 227 VGAPRERHG 253
V APRE+ G
Sbjct: 1479 VVAPREKSG 1487
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 26.6 bits (56), Expect = 9.7
Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Frame = +2
Query: 65 GGQDEEAVSVDPXXXXXXXXXXXXPKTSSTPSALTYDDYGAADVGGASPRG------HLR 226
GG +E P PKT+ S D +GA+ G G
Sbjct: 1419 GGDSDEEAEKKPSTSKKPSPKKAAPKTAEPKSKAVTDFFGASKKNGKKAAGSDDEDDESF 1478
Query: 227 VGAPRERHG 253
V APRE+ G
Sbjct: 1479 VVAPREKSG 1487
>Z34799-3|CAA84316.3| 539|Caenorhabditis elegans Hypothetical
protein F34D10.6 protein.
Length = 539
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -1
Query: 443 LLDAVADSFPVLVDLTDTAG-AAVHFHA 363
+++ +A +FP +DLTDT G A+H+ A
Sbjct: 412 IIEHLAITFPNQIDLTDTLGRTALHYAA 439
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 342 EINLDDPCMKVHCSAGRVC--EINEHGEAICNC 434
E N+D+ C HC +G C ++N H IC C
Sbjct: 367 ETNIDE-CSTAHCPSGATCVDQVNTH---ICVC 395
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNC 434
D C V C G VC N +G A C C
Sbjct: 259 DVCSSVPCQNGGVCRSN-NGIAYCEC 283
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNC 434
D C V C G VC N +G A C C
Sbjct: 259 DVCSSVPCQNGGVCRSN-NGIAYCEC 283
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNC 434
D C V C G VC N +G A C C
Sbjct: 259 DVCSSVPCQNGGVCRSN-NGIAYCEC 283
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 357 DPCMKVHCSAGRVCEINEHGEAICNC 434
D C V C G VC N +G A C C
Sbjct: 259 DVCSSVPCQNGGVCRSN-NGIAYCEC 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,395,540
Number of Sequences: 27780
Number of extensions: 210883
Number of successful extensions: 988
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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