Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_L02
(420 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 113 8e-27
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 72 3e-14
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 71 1e-13
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 69 4e-13
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 60 1e-10
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 58 7e-10
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 58 7e-10
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 56 2e-09
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 56 3e-09
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 52 3e-08
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 48 6e-07
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 44 1e-05
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 44 1e-05
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 43 2e-05
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 41 7e-05
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 41 9e-05
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 40 2e-04
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 38 6e-04
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 38 8e-04
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 34 0.010
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 29 0.22
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 28 0.51
SPCC1259.03 |rpa12||DNA-directed RNA polymerase complex I subuni... 26 2.1
SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr... 26 2.1
SPBC1709.18 |tif452|SPBC409.01|translation initiation factor eIF... 25 3.6
SPBC30B4.07c |tfb4||transcription factor TFIIH complex subunit T... 25 3.6
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 25 4.8
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 25 4.8
SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr 1|||... 25 6.3
SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma c... 25 6.3
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 24 8.4
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 113 bits (273), Expect = 8e-27
Identities = 59/139 (42%), Positives = 75/139 (53%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDKYXXXXXXXXXXXXX 182
E+K++Y KLA ++HPDKNP AGDKFKEIS AYE+L+D +KR TYD++
Sbjct: 21 ELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYDRFGEEGLQGGGADGG 80
Query: 183 FPADDLFGHFFGDIFXXXXXXXXXXXXXXEDTMHPLKVTLEDMYMGKTTKLQLSKNXXXX 362
ADDLF FFG +D +H +KVTLED+Y GKTTKL L K
Sbjct: 81 MSADDLFASFFGG--GMFGGGMPRGPRKGKDLVHTIKVTLEDLYRGKTTKLALQKKVICP 138
Query: 363 XXXXXXXXXXSAVTCEYCH 419
S +C C+
Sbjct: 139 KCSGRGGKEGSVKSCASCN 157
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 72.1 bits (169), Expect = 3e-14
Identities = 30/47 (63%), Positives = 39/47 (82%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDKY 143
E+K++Y KLA ++HPDKNP KFKEIS AYEVLSDP++R+ YD+Y
Sbjct: 21 ELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYDQY 67
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 70.5 bits (165), Expect = 1e-13
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPA-----AGDKFKEISYAYEVLSDPKKRQTYDKYXXXXXXXX 167
EIK+SY +LA HPDK P A ++F+ + AY++L DP+ R+ YD Y
Sbjct: 21 EIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESREMYDMYGMNSDSNS 80
Query: 168 XXXXXFPADDLFGHFFGDIFXX---XXXXXXXXXXXXEDTMHPLKVTLEDMYMGKTTKLQ 338
DD+ FG F D +H +++LEDM+ GK KL+
Sbjct: 81 QFDGGVNLDDVLAQMFGMNFEAGGPGKNVPRDRKRRGSDVIHDYEISLEDMFKGKEVKLR 140
Query: 339 LSKN 350
++N
Sbjct: 141 ATRN 144
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 68.5 bits (160), Expect = 4e-13
Identities = 31/49 (63%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNP--AAGDKFKEISYAYEVLSDPKKRQTYDKY 143
EIK +Y+KLAK++HPD NP AA DKF EI AYEVL DPKK++ +D Y
Sbjct: 101 EIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPKKKKAFDTY 149
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 60.5 bits (140), Expect = 1e-10
Identities = 27/50 (54%), Positives = 39/50 (78%), Gaps = 3/50 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQTYDKY 143
EI+++Y +L K++HPDKNP A +KF EI+ A+EVLSDP++R+ YD Y
Sbjct: 22 EIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDAY 71
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 57.6 bits (133), Expect = 7e-10
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 4/51 (7%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNP----AAGDKFKEISYAYEVLSDPKKRQTYDKY 143
+IK++Y KLA ++HPDKNP A +KF++IS AY+VL D K R YD++
Sbjct: 23 DIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRSQYDQF 73
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 57.6 bits (133), Expect = 7e-10
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKN--PAAGDKFKEISYAYEVLSDPKKRQTYDK 140
EIK+SY KLA + HPDKN P+A + FK +S A++VLSDP R YD+
Sbjct: 128 EIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYDR 175
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 56.4 bits (130), Expect = 2e-09
Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
Frame = +3
Query: 6 IKRSYHKLAKEFHPDKN----PAAGDKFKEISYAYEVLSDPKKRQTYDK 140
IK+SY +LA +HPDKN AA +KF++++ AY+VLSDPK R+ YDK
Sbjct: 25 IKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLREKYDK 73
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 55.6 bits (128), Expect = 3e-09
Identities = 25/52 (48%), Positives = 38/52 (73%), Gaps = 5/52 (9%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPA-----AGDKFKEISYAYEVLSDPKKRQTYDKY 143
+IK SY++L++ FHPD++ A A +KF+ I +AYEVLSDP K++ YD +
Sbjct: 23 QIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKKEIYDNF 74
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 52.4 bits (120), Expect = 3e-08
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQTYD 137
EIK++Y KLA +HPDKN A +FKE+ AY +LSDP+ R+ +D
Sbjct: 364 EIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRRRFD 411
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 48.0 bits (109), Expect = 6e-07
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDK---FKEISYAYEVLSDPKKRQTYDK 140
EIK +Y KLA ++HPD+NP D F +I+ AY +LS+ KR+ ++K
Sbjct: 24 EIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDKRKWHEK 72
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 44.0 bits (99), Expect = 1e-05
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPA----AGDKFKEISYAYEVLSDPKKRQTYDK 140
+I++ Y LA ++HPD+NP A +F+ + A+EVLSD KR YD+
Sbjct: 27 QIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRLIYDQ 76
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 44.0 bits (99), Expect = 1e-05
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAG----DKFKEISYAYEVLSDPKKRQTYDK 140
EI++ Y KL +HPD+NP +F+ I A+EVL DPK R+ +D+
Sbjct: 27 EIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLRELFDQ 76
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 42.7 bits (96), Expect = 2e-05
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKN---PAAGDKFKEISYAYEVLSDPKKRQTYD 137
EI R++ K + ++HPDKN P A +KF + AY L D + R+ YD
Sbjct: 24 EIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKAYD 71
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 41.1 bits (92), Expect = 7e-05
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDK-----FKEISYAYEVLSDPKKRQTYD 137
+IK+++ K + HPDK A+G+ FK I AYE+LSDP +R+ +D
Sbjct: 115 QIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSDPVRRRQFD 164
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 40.7 bits (91), Expect = 9e-05
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Frame = +3
Query: 6 IKRSYHKLAKEFHPD------KNPAAGDKFKEISYAYEVLSDPKKRQTYDK 140
I+R+Y K A + HPD K A +F +++ AY VLSD K+R+ YDK
Sbjct: 47 IRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRRKHYDK 97
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 39.5 bits (88), Expect = 2e-04
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDK-NPAAG----DKFKEISYAYEVLSDPKKRQTYDK 140
EIK +Y K A E HPD+ +P+A ++F+ ++ AY VLSD +R YD+
Sbjct: 19 EIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRRAQYDR 69
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 37.9 bits (84), Expect = 6e-04
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQTY 134
EIK +Y K FHPDK P+ ++ AY+VLS K RQ Y
Sbjct: 19 EIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDRQQY 65
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 37.5 bits (83), Expect = 8e-04
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDKY 143
EI R+Y K + +HPDKNP + + + + +L + + R+ YD +
Sbjct: 55 EINRAYRKKSILYHPDKNPKSKELYTLLGLIVNILRNTETRKRYDYF 101
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 33.9 bits (74), Expect = 0.010
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDK-----NPAAGDKFK---EISYAYEVLSDPKKRQTYDKY 143
+++R Y +L+ +FHPDK N + K EI+ AY L+D K R+ Y Y
Sbjct: 113 DVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDKTRENYALY 167
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 29.5 bits (63), Expect = 0.22
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQTYD 137
+I+ Y K + HPDK NP A D F + A L + K R++ D
Sbjct: 46 DIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESLD 93
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 28.3 bits (60), Expect = 0.51
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 16/63 (25%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDK----------------NPAAGDKFKEISYAYEVLSDPKKRQTY 134
+IKR Y +L K+ HPDK N + F+ + A +LSD ++R+ Y
Sbjct: 47 DIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAANALLSDKRRREEY 106
Query: 135 DKY 143
D++
Sbjct: 107 DRF 109
>SPCC1259.03 |rpa12||DNA-directed RNA polymerase complex I subunit
Rpa12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 119
Score = 26.2 bits (55), Expect = 2.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 55 ILQLETNSKKLATLTRCCPILKNDRLMINTV 147
I+Q+E+ ++ AT+ CP ND + +T+
Sbjct: 63 IVQVESQKEEAATIEEKCPKCGNDHMTFHTL 93
>SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 26.2 bits (55), Expect = 2.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 382 PPTPLQGPQITFLLNCSLVVLPIYISS-KVTFRGCIVSS 269
PP PL P+I F+ +CS + P +S + TFR ++ +
Sbjct: 269 PPKPL--PRIRFIRSCSSPLAPPVLSKLEATFRAPVLEA 305
>SPBC1709.18 |tif452|SPBC409.01|translation initiation factor eIF4E
4F complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 25.4 bits (53), Expect = 3.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +1
Query: 217 VIYLAWGVEAEPAGQLVVKTQCTL*KLLWKICIWVKQPN 333
++ A G +P G+ V C + K ++I +W + N
Sbjct: 159 MVLAAIGETLDPTGKEVTGVVCNMRKGFYRIAVWTRNCN 197
>SPBC30B4.07c |tfb4||transcription factor TFIIH complex subunit Tfb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.4 bits (53), Expect = 3.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -2
Query: 326 CFTHIHIFQSNF*RVHCVFTTSWPAGSASTPHAKYITKEMSKQV 195
CF H + F C+ P ST H K+ + MSK++
Sbjct: 252 CFCHKKVLDIGFVCSVCLSIFCEPRVHCSTCHTKFTVEPMSKKL 295
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.0 bits (52), Expect = 4.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 351 HFYLTVVWLF--YPYTYLPK*LLEGALCLHHEL 259
HFY + ++ + Y + YLP ++ L LHH L
Sbjct: 643 HFYRSTMFFYMTYVFHYLPFFIMGRQLFLHHYL 675
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 25.0 bits (52), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 417 DSIHKSQLIPVFLQLLYKDHK*HFYLTVVWLF 322
DSIH+ L F L +KD + +T +WLF
Sbjct: 82 DSIHREALNSSFKILEFKDIEFDDPVTEIWLF 113
>SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr
1|||Manual
Length = 459
Score = 24.6 bits (51), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 355 ITFLLNCSLVVLPIYISSKV-TFRGCIVS 272
+ F + C + + IY+SSKV F CI S
Sbjct: 54 VEFFIFCLIPLFVIYVSSKVGVFTLCIAS 82
>SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma
catalytic subunit|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1018
Score = 24.6 bits (51), Expect = 6.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 405 KSQLIPVFLQLLYKDHK*HFYLTVVWLF 322
KS+L P+ L+L +K H + T W+F
Sbjct: 486 KSRLAPILLRLKWKKHPLAWSDTYGWVF 513
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 24.2 bits (50), Expect = 8.4
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 225 IYHQRNVQTSHLQGSLHLDHLPEVLSNRIYH-KSVVF 118
IY+ +NV + + GS +L H ++ ++ I+ KS VF
Sbjct: 316 IYNGKNVSSCNPSGSEYLQHASKLENSGIHQSKSSVF 352
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,693,062
Number of Sequences: 5004
Number of extensions: 33126
Number of successful extensions: 119
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 148351622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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