Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_L02
(420 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 82 2e-16
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 80 6e-16
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 69 1e-12
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 4e-11
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 60 1e-09
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 59 2e-09
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 58 3e-09
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 58 3e-09
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 57 5e-09
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 52 2e-07
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 4e-07
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 51 4e-07
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 45 3e-05
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 44 4e-05
SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 44 7e-05
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 43 9e-05
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 41 4e-04
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 41 5e-04
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006
SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29) 35 0.031
SB_407| Best HMM Match : DnaJ (HMM E-Value=0.0039) 32 0.17
SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10) 32 0.17
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 0.17
SB_13154| Best HMM Match : DnaJ (HMM E-Value=7.9e-11) 31 0.29
SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056) 30 0.68
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.89
SB_6406| Best HMM Match : Mis12 (HMM E-Value=0.49) 29 2.1
SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022) 28 2.7
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031) 28 2.7
SB_57955| Best HMM Match : Ribosomal_L41 (HMM E-Value=5) 28 3.6
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_38350| Best HMM Match : OCIA (HMM E-Value=6.7) 27 6.3
SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007) 27 6.3
SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067) 27 6.3
SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2) 27 6.3
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 27 8.3
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 99.5 bits (237), Expect = 1e-21
Identities = 55/140 (39%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDKYXXXXXXXXXXXXX 182
EIK+SY KLA ++HPDKNP GD+FK+IS AYEVLSD KKR+ YD+
Sbjct: 80 EIKKSYRKLALKYHPDKNPDEGDRFKQISQAYEVLSDEKKRKIYDEGGEDAIKGGGEGGG 139
Query: 183 FPAD-DLFGHFFGDIFXXXXXXXXXXXXXXEDTMHPLKVTLEDMYMGKTTKLQLSKNXXX 359
F + D+F FFG +D +H L+VTLE++Y G T +L L KN
Sbjct: 140 FHSPMDIFDMFFG-----TGRAAHQGERRGKDMVHQLRVTLEELYNGATRQLALQKNVIC 194
Query: 360 XXXXXXXXXXXSAVTCEYCH 419
+C+ CH
Sbjct: 195 SKCDGRGGKEGCVESCQTCH 214
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 81.8 bits (193), Expect = 2e-16
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDKYXXXXXXXXXXXXX 182
+IK++Y KLAKE HPDKNP G+KFK+I++AYE+LSDP+KR+ YD+Y
Sbjct: 20 DIKKAYRKLAKELHPDKNPDTGEKFKDITFAYEILSDPEKRELYDRYGEKGLREGAGGGA 79
Query: 183 FPADDLFGHFFG 218
+D+ H FG
Sbjct: 80 -GFEDILSHIFG 90
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 80.2 bits (189), Expect = 6e-16
Identities = 31/47 (65%), Positives = 42/47 (89%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDKY 143
+IK++Y KLAKE HPDKNP G+KFK+I++AYE+LSDP+KR+ YD+Y
Sbjct: 20 DIKKAYRKLAKELHPDKNPDTGEKFKDITFAYEILSDPEKRELYDRY 66
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 69.3 bits (162), Expect = 1e-12
Identities = 31/49 (63%), Positives = 40/49 (81%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKN--PAAGDKFKEISYAYEVLSDPKKRQTYDKY 143
+IK++Y K A ++HPDKN P A +KFKEIS AYEVLSDPKK++ YD+Y
Sbjct: 19 DIKKAYRKQALKYHPDKNKSPGAEEKFKEISEAYEVLSDPKKKEIYDQY 67
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 65.7 bits (153), Expect = 1e-11
Identities = 29/49 (59%), Positives = 40/49 (81%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKN--PAAGDKFKEISYAYEVLSDPKKRQTYDKY 143
E+K++Y K A ++HPDKN P A +KFKEI+ AYEVLSDP+KR+ +D+Y
Sbjct: 19 ELKKAYKKQAFKYHPDKNKDPGAEEKFKEIAEAYEVLSDPQKREIFDQY 67
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 64.1 bits (149), Expect = 4e-11
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPD--KNPAAGDKFKEISYAYEVLSDPKKRQTYDKYXXXXXXXX--- 167
EIK++Y +LAK++HPD K+ +A +KF+E+S AYEVLSD KR+ YD +
Sbjct: 74 EIKKAYFELAKKYHPDTNKDKSASEKFQEVSEAYEVLSDDGKRKAYDSFGQTDFSGAQGG 133
Query: 168 -XXXXXFPADDLFGHFFG 218
F A+D+ FFG
Sbjct: 134 PFGGAGFDAEDILKSFFG 151
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 61.7 bits (143), Expect = 2e-10
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDK 140
+I+R+Y +LA ++HPDKN + FKE+S AYEVL DP++R+ +DK
Sbjct: 19 DIRRAYRRLALKYHPDKNAGTEENFKEVSEAYEVLCDPQQRERFDK 64
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 4/51 (7%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPA----AGDKFKEISYAYEVLSDPKKRQTYDKY 143
++K++Y + A +HPDKNP A +KFK++S AYEVLSD +KR YDKY
Sbjct: 19 DVKKAYRRQALRWHPDKNPTNREHAEEKFKKLSEAYEVLSDKEKRDIYDKY 69
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 58.8 bits (136), Expect = 2e-09
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKN---PAAGDKFKEISYAYEVLSDPKKRQTYD-KYXXXXXXXXX 170
+IKR+Y KLA + HPDKN P A +KF +I AYEVL+D +R+ YD +
Sbjct: 40 QIKRAYRKLAMKLHPDKNKDDPKAQEKFHDIGAAYEVLADDDQRKIYDQRGEEGLKNAGH 99
Query: 171 XXXXFPADDLFGHFFGDIFXXXXXXXXXXXXXXEDTMHPLKVTLEDMYMG 320
P FG F D L+VTLE++Y G
Sbjct: 100 RDHSDPFSSFFGGFGFHFDGHNGHSHSQQVPRGSDLTVDLEVTLEELYNG 149
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 58.0 bits (134), Expect = 3e-09
Identities = 25/49 (51%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKN--PAAGDKFKEISYAYEVLSDPKKRQTYDKY 143
+IK+ Y KL+ ++HPDKN P+A KF++ + AY+VLSDPKKR Y+++
Sbjct: 19 DIKKEYRKLSLKYHPDKNQEPSAEVKFRQAAEAYDVLSDPKKRAIYNQF 67
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 58.0 bits (134), Expect = 3e-09
Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAG--DKFKEISYAYEVLSDPKKRQTYDKY 143
+IK++Y + A FHPDKN +G +KFKEIS AY+VL+DP++R +D Y
Sbjct: 19 DIKKAYRRQALIFHPDKNKNSGAEEKFKEISEAYKVLTDPRQRDIFDMY 67
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/49 (48%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPA--AGDKFKEISYAYEVLSDPKKRQTYDKY 143
+IK+++ K+A ++HPDKN A +KF+E++ AYEVLSD KR+ YD++
Sbjct: 41 QIKKAFRKMAVKYHPDKNKGKDAEEKFREVAEAYEVLSDENKRRQYDQF 89
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNP----AAGDKFKEISYAYEVLSD 113
+IK+SY KLA ++HPDKNP A KFKEIS AYEVLSD
Sbjct: 18 DIKKSYRKLALKWHPDKNPQNKEEAERKFKEISEAYEVLSD 58
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 52.0 bits (119), Expect = 2e-07
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Frame = +3
Query: 6 IKRSYHKLAKEFHPDKNPAAGDK----FKEISYAYEVLSDPKKRQTYDKY 143
+K++Y KLA ++HPDKN ++ F+EI AY+VLSDP++R YDK+
Sbjct: 20 LKKTYRKLALKWHPDKNLDNAEESTRVFREIQQAYDVLSDPQERAFYDKH 69
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 50.8 bits (116), Expect = 4e-07
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDK--------FKEISYAYEVLSDPKKRQTYDKYXXXXX 158
EIK++Y K A + HPD++ A D+ FKE++ AY +LSDPKK++ YD
Sbjct: 174 EIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILSDPKKKRRYD--SGQDL 231
Query: 159 XXXXXXXXFPADDLFGHFFG 218
F + +F FFG
Sbjct: 232 EEGYGMDDFDPNSIFQAFFG 251
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 50.8 bits (116), Expect = 4e-07
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDK--------FKEISYAYEVLSDPKKRQTYDKYXXXXX 158
EIK++Y K A + HPD++ A D+ FKE++ AY +LSDPKK++ YD
Sbjct: 174 EIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILSDPKKKRRYD--SGQDL 231
Query: 159 XXXXXXXXFPADDLFGHFFG 218
F + +F FFG
Sbjct: 232 EEGYGMDDFDPNSIFQAFFG 251
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDKFK---EISYAYEVLSDPKKRQTYDKYXXXXXXXX-- 167
EIK ++ K KEFHPD NP D K ++S AY LS +RQ YD
Sbjct: 23 EIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSARRQQYDARLNSSFASTYR 82
Query: 168 -XXXXXFPADDLFGHFFGD 221
+ + FGH G+
Sbjct: 83 PATASTYSSSSPFGHRDGE 101
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDKFK---EISYAYEVLSDPKKRQTYDKYXXXXXXXX-- 167
EIK ++ K KEFHPD NP D K ++S AY LS +RQ YD
Sbjct: 84 EIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSARRQQYDARLNSSFASTYR 143
Query: 168 -XXXXXFPADDLFGHFFGD 221
+ + FGH G+
Sbjct: 144 PATASTYSSSSPFGHRDGE 162
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNP---AAGDKFKEISYAYEVLSDPKKRQTYD 137
EI ++Y K A + HPDKNP A + F ++S A EVL+DPK R ++
Sbjct: 22 EILKAYRKKALKCHPDKNPDNPKASELFHKLSKALEVLTDPKARAAFN 69
>SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 43.6 bits (98), Expect = 7e-05
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPA--AGDKFKEISYAYEVLSDPKKRQTYDK 140
EIK +Y++L++ +HPD N + A ++F E++ AY LS + R+ YDK
Sbjct: 66 EIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRREYDK 113
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 43.6 bits (98), Expect = 7e-05
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPA--AGDKFKEISYAYEVLSDPKKRQTYDK 140
EIK +Y++L++ +HPD N + A ++F E++ AY LS + R+ YDK
Sbjct: 213 EIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRREYDK 260
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 43.2 bits (97), Expect = 9e-05
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKK 122
EI+R Y L+K++HPDK KF I+ AYE +SD K
Sbjct: 1263 EIRRQYRSLSKKYHPDKETGDPRKFMRIAKAYEAVSDFNK 1302
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDK-----NPAAGDKFKEISYAYEVLSDPKKRQTYDK 140
EIKR+Y K++ + HPD+ A KF+ +S +Y +LSD +KR YD+
Sbjct: 30 EIKRAYRKISLQVHPDRADKGEKEKATRKFQALSKSYCILSDKEKRAIYDE 80
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDK---FKEISYAYEVLSDPKKRQTYDK 140
+IK +Y+KL+ + HPD++ + K F+EI+ AY VL + + R+ YD+
Sbjct: 87 KIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRKQYDR 135
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDK---FKEISYAYEVLSDPKKRQTYDK 140
+IK +Y+KL+ + HPD++ + K F+EI+ AY VL + + R+ YD+
Sbjct: 87 KIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRKQYDR 135
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPA--AGDKFKEISYAYEVLSDPKKRQTYD 137
EI+R+Y +++ + HPD+N A KF+++ EVL D KR+ YD
Sbjct: 2498 EIRRAYRRISLQLHPDRNKEDDAELKFRKLVAVAEVLKDEDKRKRYD 2544
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 40.7 bits (91), Expect = 5e-04
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDK-----FKEISYAYEVLSDPKKRQTYD 137
EI ++Y KLA ++HPD K F +I+ A EVL+DP+KR YD
Sbjct: 223 EITKAYRKLAVKWHPDNYKGEDKKKAEKMFIDIAAAKEVLTDPEKRAKYD 272
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKN----PAAGDKFKEISYAYEVLSDPKKRQ 128
EIK+ Y KLA ++HPD++ A F EI AYE+LS K ++
Sbjct: 809 EIKKRYKKLAMKWHPDRHRDNKEEAQKHFMEIQEAYEILSKLKTKR 854
>SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 926
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPD--KNPAAGDKFKEISYAYEVL 107
+ + +Y KLAK++HPD K+ A G++F I +AY V+
Sbjct: 405 DAREAYLKLAKQYHPDSGKSTADGERFAMIEHAYRVV 441
>SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29)
Length = 445
Score = 34.7 bits (76), Expect = 0.031
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAGDK---FKEISYAYEVLSDPKKRQTYDKY 143
+I + K AKE+HPDK D F + A +VL D K R YD +
Sbjct: 303 QINTEFKKKAKEWHPDKKRNDTDSHEYFARLKKARDVLCDEKMRAKYDHW 352
>SB_407| Best HMM Match : DnaJ (HMM E-Value=0.0039)
Length = 106
Score = 32.3 bits (70), Expect = 0.17
Identities = 10/19 (52%), Positives = 18/19 (94%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNP 59
+I+++Y +LA+++HPDKNP
Sbjct: 85 KIRKAYFRLAQKYHPDKNP 103
>SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10)
Length = 141
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 10/48 (20%)
Frame = +3
Query: 6 IKRSYHKLAKEFHPDKNPAAG----------DKFKEISYAYEVLSDPK 119
IKR+Y KL E HPDK A G K +EI AYE++ K
Sbjct: 91 IKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQK 138
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 26.6 bits (56), Expect(2) = 0.17
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 75 FKEISYAYEVLSDPKKRQTY 134
F ++ AYEVLSDP+ + Y
Sbjct: 202 FSKVQKAYEVLSDPETKAIY 221
Score = 24.2 bits (50), Expect(2) = 0.17
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKN 56
E+K +Y +L +HPDK+
Sbjct: 146 ELKAAYRRLCVLYHPDKH 163
>SB_13154| Best HMM Match : DnaJ (HMM E-Value=7.9e-11)
Length = 340
Score = 31.5 bits (68), Expect = 0.29
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 6 IKRSYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYD 137
+K++ K +HPDKN ++ + I AY L D + R Y+
Sbjct: 155 LKKACRKQLLIWHPDKNGGDAEQARNIIMAYSCLEDDETRARYN 198
>SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056)
Length = 219
Score = 30.3 bits (65), Expect = 0.68
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 48 DKNPAAGDKFKEISYAYEVLSDPKKRQTYD 137
D A KF+ I+ AYE L DP++R YD
Sbjct: 74 DDKENAIKKFQLIATAYETLKDPEQRNDYD 103
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.9 bits (64), Expect = 0.89
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAAG--DKFKEIS 89
+I R+Y KLA HPDK+ A G + FK +S
Sbjct: 158 DINRAYKKLAVLIHPDKSVAPGSEEAFKALS 188
>SB_6406| Best HMM Match : Mis12 (HMM E-Value=0.49)
Length = 714
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 175 VEASLQMTCLDISLVIYLAWGVEAEPAGQLVVKTQCTL*KLLWKICIWVKQP 330
+ +SL +TC I+ I+LA P V L ++ ++ +W+ +P
Sbjct: 593 MSSSLGVTCSPITWTIWLACRTRGMPVYTAFVMQHSKLCSMIRRLAVWIVEP 644
>SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022)
Length = 118
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKNPAA 65
EIK +Y++L++ +HPD N +A
Sbjct: 90 EIKSAYYELSRIYHPDLNSSA 110
>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
Length = 1099
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Frame = -1
Query: 249 LCFHPPCQIYHQRNVQTSHLQGSLH----LDHLPEVLSNR---IYHK-SVVF 118
+ +HPP +IYH+ ++ +H + H P V+ +R +YH+ S+VF
Sbjct: 306 IIYHPPPEIYHRPDIVVHRAPIMIHRAPIIYHQPPVVVHRPAIVYHQPSIVF 357
>SB_57955| Best HMM Match : Ribosomal_L41 (HMM E-Value=5)
Length = 404
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 175 VEASLQMTCLDISLVIYLAWGVEAEPAGQLVVKTQCTL*KLLWKICIWVKQP 330
+ +SL +TC I+ I+LA P V L ++ ++ +W+ +P
Sbjct: 282 MSSSLGVTCSPITWTIWLACRTREMPVYTAFVMQHSKLWSMVRRLAVWIVEP 333
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDKN 56
EI++++ KLA HPDKN
Sbjct: 43 EIRKAFKKLALRLHPDKN 60
>SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -1
Query: 276 CLHHELARGLCFHPPCQIYHQRNVQTSHLQGSLHLDH 166
C H ++A L PC H T L+ H DH
Sbjct: 706 CEHLDIANTLLLRTPCYCEHPAIANTLPLRSPCHCDH 742
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 382 PPTPLQGPQ-ITFLLNCSLVVLPIYISSKVTF 290
PP PL ITFLLN L P+ SS +TF
Sbjct: 482 PPQPLPSSSAITFLLNHYLPPQPLPSSSTITF 513
Score = 27.1 bits (57), Expect = 6.3
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 382 PPTPLQ-GPQITFLLNCSLVVLPIYISSKVTF 290
PP PL ITFLLN L P+ SS +TF
Sbjct: 520 PPQPLPFSSAITFLLNHYLPPQPLPSSSTITF 551
>SB_38350| Best HMM Match : OCIA (HMM E-Value=6.7)
Length = 537
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 225 IYHQRNVQTSHLQGSLHLDHLPEVLSNRI 139
IYH R++ T +L SL H+ + SNRI
Sbjct: 49 IYHYRSIITLYLFSSLTDGHVRSMTSNRI 77
>SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007)
Length = 831
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDK 53
+IKR Y KLA HPDK
Sbjct: 815 DIKRQYRKLAVLIHPDK 831
>SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067)
Length = 29
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 3 EIKRSYHKLAKEFHPDK 53
+IKR Y KLA HPDK
Sbjct: 13 DIKRQYRKLAVLIHPDK 29
>SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2)
Length = 356
Score = 27.1 bits (57), Expect = 6.3
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Frame = -1
Query: 249 LCFHPPCQIYHQRNVQTSHLQGSLH----LDHLPEVLSNR---IYHK-SVVF 118
+ +HPP ++YH+ ++ LH + H P V+ +R IYH+ +VF
Sbjct: 157 IIYHPPPEVYHRPDIVVHRAPIMLHRPAIIYHQPPVVVHRPAIIYHQPPIVF 208
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Frame = -1
Query: 249 LCFHPPCQIYHQRNVQTSHLQGSLH----LDHLPEVLSNR---IYHK-SVVF 118
+ +HPP ++YH+ ++ LH + H P V+ +R +YH+ +VF
Sbjct: 1522 IIYHPPPEVYHRPDIVVHRAPIVLHRPPIIYHQPPVIVHRPAVVYHQPPIVF 1573
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,324,283
Number of Sequences: 59808
Number of extensions: 230186
Number of successful extensions: 586
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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