Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K24
(418 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 201 4e-53
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 201 4e-53
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 201 4e-53
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 108 3e-25
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 105 4e-24
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 59 3e-10
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 52 4e-08
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 42 4e-05
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 41 9e-05
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 41 9e-05
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 39 3e-04
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 31 0.054
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 27 0.074
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.22
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 27 1.2
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 27 1.5
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 2.0
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 26 2.7
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 26 2.7
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 25 3.6
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 4.7
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 4.7
SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex s... 25 6.2
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 24 8.2
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 24 8.2
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 201 bits (490), Expect = 4e-53
Identities = 92/99 (92%), Positives = 95/99 (95%)
Frame = +2
Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 268
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 269 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFI 99
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 201 bits (490), Expect = 4e-53
Identities = 92/99 (92%), Positives = 95/99 (95%)
Frame = +2
Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 268
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 269 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFI 99
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 201 bits (490), Expect = 4e-53
Identities = 92/99 (92%), Positives = 95/99 (95%)
Frame = +2
Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 268
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 269 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFI 99
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 108 bits (260), Expect = 3e-25
Identities = 48/93 (51%), Positives = 66/93 (70%)
Frame = +2
Query: 110 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 289
+++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + ER
Sbjct: 178 VHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEER 237
Query: 290 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIN 388
RG+T+D+A FE+ K I DAPGHRDFI+
Sbjct: 238 ARGVTMDVASTTFESDKKIYEIGDAPGHRDFIS 270
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 105 bits (251), Expect = 4e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Frame = +2
Query: 101 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 280
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 281 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
ERE+G T+++ FET +++DAPGH+ ++
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYV 330
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 58.8 bits (136), Expect = 3e-10
Identities = 36/97 (37%), Positives = 50/97 (51%)
Frame = +2
Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 274
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 275 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
E+ RGITI A ++ET + +D PGH D+I
Sbjct: 94 APEEKARGITISSAHVEYETANRHYAHVDCPGHADYI 130
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 52.0 bits (119), Expect = 4e-08
Identities = 33/93 (35%), Positives = 46/93 (49%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 293 RGITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
RGITI+ A F + +ID PGH DF E
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFE 109
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 41.9 bits (94), Expect = 4e-05
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 293 RGITIDI----ALWKFETGKYYVTIIDAPGHRDFINEHDH 400
RGIT+ ++ + Y + +ID PGH DF E H
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMH 143
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 40.7 bits (91), Expect = 9e-05
Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +2
Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 259
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 260 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
+ L AE D+ T + V +ID+PGH DF +E
Sbjct: 73 TAIS-LFAEMTDDDMKDMKEPADGTD-FLVNLIDSPGHVDFSSE 114
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 40.7 bits (91), Expect = 9e-05
Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +2
Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 259
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 260 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
+ L AE D+ T + V +ID+PGH DF +E
Sbjct: 73 TAIS-LFAEMTDDDMKDMKEPADGTD-FLVNLIDSPGHVDFSSE 114
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 39.1 bits (87), Expect = 3e-04
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 293 RGITIDIA----LWK---------------FETGKYYVTIIDAPGHRDFINE 391
+GITI A W+ FE Y + IID PGH DF E
Sbjct: 111 KGITIQSAATHCTWERTVDQIEANEKQKTDFEK-SYNINIIDTPGHIDFTIE 161
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 31.5 bits (68), Expect = 0.054
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 269 DKLKAER-ERGITIDIALWKFETGKYYV--TIIDAPGHRDFINEHDHW 403
+K++A+ E+ + I+I + E +++ T+ID PG DFIN W
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINNSGCW 107
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 27.5 bits (58), Expect(2) = 0.074
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 236 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETGKYYVTIIDAPGHRDF 382
GK + A+ + + GIT I + F+ G ++T +D PGH F
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAF 233
Score = 22.2 bits (45), Expect(2) = 0.074
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 116 IVVIGHVDSGKST 154
+ ++GHVD GK+T
Sbjct: 174 VTLMGHVDHGKTT 186
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 29.5 bits (63), Expect = 0.22
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKG----SFKYAWVLD 271
N ++ HVD GK+T L+ G I + T+ + E+ +G S +
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSAISLFFK 80
Query: 272 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
+ E+ + D Y + +ID+PGH DF +E
Sbjct: 81 VISQNDEKRVEKD----------YLINLIDSPGHVDFSSE 110
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 27.1 bits (57), Expect = 1.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 300 IPRSRSAFSLSNTQAYLKEPLPISWASFSNFSMVRLSIPPH 178
IP+ A S+ N++ + ++ LP + S V+L +P H
Sbjct: 173 IPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 26.6 bits (56), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 347 VTIIDAPGHRDFINEHDHWN 406
+T++D PG DFI+ WN
Sbjct: 91 LTVLDTPGFGDFIDNTSCWN 110
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 2.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 180 AVVSTNVPSKSSRRKPRKWVRVPS 251
A++S + K + +P KWV VPS
Sbjct: 224 ALISNGLKVKETSEEPEKWVVVPS 247
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.8 bits (54), Expect = 2.7
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +2
Query: 122 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAERER 295
++GHVD+GK+ +L + +++ E Q++G F + K K ++
Sbjct: 489 ILGHVDTGKTKLLDNL-------RRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKK 541
Query: 296 GITIDIALWKFETGKYYVTIIDAPGHRDFIN 388
G K + + IID PGH F N
Sbjct: 542 G--------KLQYNIPGLLIIDTPGHESFTN 564
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 2.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 330 SNFQRAISMVIPRSRSAFSLSNTQAYLKEPLPISWASFSNFSMV 199
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.4 bits (53), Expect = 3.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 347 VTIIDAPGHRDFINEHDHW 403
+ +ID PG DFI+ D W
Sbjct: 158 LNVIDTPGFGDFIDNTDCW 176
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 4.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 83 PKMGKEKVHINIVVIGHVDSGKST 154
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 4.7
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 301 HHRY-CSLEVRNRQILCHHH 357
HH++ C L V+N+++ H H
Sbjct: 196 HHKFFCDLCVKNKKVFTHEH 215
>SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex
subunit Arc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 24.6 bits (51), Expect = 6.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 321 QRAISMVIPRSRSAFSLSNTQAYLKEPLPISWASFSN 211
Q A+S +IP++RSA N LK L S+ + N
Sbjct: 33 QAAVSQLIPQARSAIQTGNALQGLKTLL--SYVPYGN 67
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 24.2 bits (50), Expect = 8.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 116 IVVIGHVDSGKSTTTGHLIYKC 181
IVV+G SGKST + +C
Sbjct: 115 IVVVGETGSGKSTQIPQFLNEC 136
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 24.2 bits (50), Expect = 8.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 119 VVIGHVDSGKSTTTGHLIYKCG 184
+V+GH GK+T +Y+ G
Sbjct: 45 IVLGHTGCGKTTQIPQFLYEAG 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,689,853
Number of Sequences: 5004
Number of extensions: 32960
Number of successful extensions: 139
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 146319408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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