Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K24
(418 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 212 8e-56
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 212 8e-56
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 212 8e-56
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 212 8e-56
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 4e-34
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 120 6e-28
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 120 6e-28
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 111 2e-25
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 54 3e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 51 4e-07
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 50 9e-07
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 50 9e-07
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 50 9e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 45 2e-05
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 45 2e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 40 7e-04
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 40 7e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 34 0.048
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 34 0.048
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.78
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.0
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.0
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 29 1.0
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 29 1.0
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 29 1.8
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 29 1.8
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 23 2.8
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.1
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 28 3.1
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 28 3.1
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 3.1
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 5.5
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 5.5
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 7.2
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 7.2
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 26 9.5
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 26 9.5
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 212 bits (518), Expect = 8e-56
Identities = 97/99 (97%), Positives = 98/99 (98%)
Frame = +2
Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 268
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 269 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 212 bits (518), Expect = 8e-56
Identities = 97/99 (97%), Positives = 98/99 (98%)
Frame = +2
Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 268
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 269 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 212 bits (518), Expect = 8e-56
Identities = 97/99 (97%), Positives = 98/99 (98%)
Frame = +2
Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 268
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 269 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 212 bits (518), Expect = 8e-56
Identities = 97/99 (97%), Positives = 98/99 (98%)
Frame = +2
Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 268
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 269 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 4e-34
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +2
Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 268
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 269 DKLKAER 289
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 120 bits (288), Expect = 6e-28
Identities = 52/97 (53%), Positives = 71/97 (73%)
Frame = +2
Query: 98 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 277
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 278 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIN 388
+ ERERG+T+DI FET + ++DAPGH+DFI+
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFIS 263
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 120 bits (288), Expect = 6e-28
Identities = 52/97 (53%), Positives = 71/97 (73%)
Frame = +2
Query: 98 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 277
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 278 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIN 388
+ ERERG+T+DI FET + ++DAPGH+DFI+
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFIS 281
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 111 bits (267), Expect = 2e-25
Identities = 48/98 (48%), Positives = 70/98 (71%)
Frame = +2
Query: 92 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 271
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 272 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
ERE+G T+++ FET K + TI+DAPGH+ F+
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFV 201
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 54.4 bits (125), Expect = 3e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 293 RGITIDIALWKFETGKYYVTIIDAPGHRDF 382
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 50.8 bits (116), Expect = 4e-07
Identities = 33/93 (35%), Positives = 45/93 (48%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 293 RGITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
RGITI A + + IID PGH DF E
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVE 128
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 49.6 bits (113), Expect = 9e-07
Identities = 31/97 (31%), Positives = 45/97 (46%)
Frame = +2
Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 274
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 275 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
E+ RGITI+ ++ET K + ID PGH D+I
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYI 126
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 49.6 bits (113), Expect = 9e-07
Identities = 31/97 (31%), Positives = 45/97 (46%)
Frame = +2
Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 274
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 275 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
E+ RGITI+ ++ET K + ID PGH D+I
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYI 127
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 49.6 bits (113), Expect = 9e-07
Identities = 31/97 (31%), Positives = 45/97 (46%)
Frame = +2
Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 274
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 275 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
E+ RGITI+ ++ET K + ID PGH D+I
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYI 127
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.8 bits (111), Expect = 2e-06
Identities = 32/93 (34%), Positives = 43/93 (46%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 293 RGITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
RGIT+ Y + +ID PGH DF E
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAE 118
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 45.2 bits (102), Expect = 2e-05
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +2
Query: 101 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 274
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 275 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
K E++RGITI++A +E+ + D PGH DFI
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFI 122
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 45.2 bits (102), Expect = 2e-05
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +2
Query: 101 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 274
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 275 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 385
K E++RGITI++A +E+ + D PGH DFI
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFI 122
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 39.9 bits (89), Expect = 7e-04
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 265
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 266 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
L+K E +G T+++ K + + + +ID+PGH DF +E
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSE 126
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 39.9 bits (89), Expect = 7e-04
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 265
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 266 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
L+K E +G T+++ K + + + +ID+PGH DF +E
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSE 126
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.9 bits (74), Expect = 0.048
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +2
Query: 95 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 271
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 272 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
+ E+ RGIT+ + + +ID+PGH DF E
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGE 99
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.9 bits (74), Expect = 0.048
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +2
Query: 95 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 271
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 272 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
+ E+ RGIT+ + + +ID+PGH DF E
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGE 99
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.78
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 367 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 278
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 191 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 191 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 83 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 175
P K+ + + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 83 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 175
P K+ + + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 110 INIVVIGHVDSGKSTTT 160
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 110 INIVVIGHVDSGKSTTT 160
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 254 YAWVLDKLK---AERERGITIDIALWKFETGKYYVTIIDAPGHRDFINEHDH 400
Y W+LD + A + R ++ + + + E+GK ++I PGH HD+
Sbjct: 32 YPWLLDFINNRSATQTRNLSANTVVHQAESGKTELSISFLPGHGTHFFVHDY 83
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 254 YAWVLDKLK---AERERGITIDIALWKFETGKYYVTIIDAPGHRDFINEHDH 400
Y W+LD + A + R ++ + + + E+GK ++I PGH HD+
Sbjct: 78 YPWLLDFINNRSATQTRNLSANTVVHQAESGKTELSISFLPGHGTHFFVHDY 129
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 23.4 bits (48), Expect(2) = 2.8
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 236 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDF 382
GK + A ++ A GIT I + E K VT +D PGH F
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAF 217
Score = 23.0 bits (47), Expect(2) = 2.8
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 116 IVVIGHVDSGKST 154
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 260 WVLDKLKAERERGITIDIALWKFETGKYYVTII 358
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 260 WVLDKLKAERERGITIDIALWKFETGKYYVTII 358
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.9 bits (59), Expect = 3.1
Identities = 22/93 (23%), Positives = 40/93 (43%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 293 RGITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
+ + I + Y + IID PGH +F +E
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDE 217
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 27.9 bits (59), Expect = 3.1
Identities = 22/93 (23%), Positives = 40/93 (43%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 293 RGITIDIALWKFETGKYYVTIIDAPGHRDFINE 391
+ + I + Y + IID PGH +F +E
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDE 92
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 260 WVLDKLKAERERGITIDIALWKFETGKYYVTII 358
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 83 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 241
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 83 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 241
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 83 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 241
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 72 LLDSLFHFTKLFLQTLTTD 16
L SL HF+K+ +QT+TTD
Sbjct: 1683 LAASLTHFSKMNIQTMTTD 1701
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 72 LLDSLFHFTKLFLQTLTTD 16
L SL HF+K+ +QT+TTD
Sbjct: 1683 LAASLTHFSKMNIQTMTTD 1701
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 113 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 292
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 141 PASPQQLVT*STNAVVSTNVPSKSS 215
P+SPQQL NA STNV + S
Sbjct: 120 PSSPQQLHLAFANATTSTNVTNAKS 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,377,676
Number of Sequences: 27780
Number of extensions: 184605
Number of successful extensions: 646
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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