Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K20
(539 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effec... 131 3e-31
U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effec... 131 3e-31
U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical pr... 30 0.93
U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthas... 30 0.93
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 30 0.93
U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine rece... 28 3.7
AF039049-2|AAB94252.2| 297|Caenorhabditis elegans Serpentine re... 28 4.9
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 6.5
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 27 6.5
AL132862-25|CAB60566.2| 60|Caenorhabditis elegans Hypothetical... 27 8.6
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 27 8.6
>U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effect
lethal protein32, isoform a protein.
Length = 484
Score = 131 bits (317), Expect = 3e-31
Identities = 61/111 (54%), Positives = 82/111 (73%)
Frame = +3
Query: 63 VRNFNYTSTMNNKLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSS 242
V+ YT+ N +L ++ + DPE+F+++ EKKRQ+ GLE+IASENFTS V+ L S
Sbjct: 13 VQRHKYTN--NENILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGS 70
Query: 243 CLHNKYSEGMPYQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPL 395
+ NKYSEG P RYYGGNEFID++E+L Q R+LE + L+P +WGVNVQPL
Sbjct: 71 AMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPL 121
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1
Query: 397 SGSPANFAVYTGVVEPHGRIMGLDLPDGG 483
SGSPANFAVYT +V +GRIMGLDLPDGG
Sbjct: 122 SGSPANFAVYTAIVGSNGRIMGLDLPDGG 150
>U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effect
lethal protein32, isoform b protein.
Length = 507
Score = 131 bits (317), Expect = 3e-31
Identities = 61/111 (54%), Positives = 82/111 (73%)
Frame = +3
Query: 63 VRNFNYTSTMNNKLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSS 242
V+ YT+ N +L ++ + DPE+F+++ EKKRQ+ GLE+IASENFTS V+ L S
Sbjct: 36 VQRHKYTN--NENILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGS 93
Query: 243 CLHNKYSEGMPYQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPL 395
+ NKYSEG P RYYGGNEFID++E+L Q R+LE + L+P +WGVNVQPL
Sbjct: 94 AMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPL 144
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1
Query: 397 SGSPANFAVYTGVVEPHGRIMGLDLPDGG 483
SGSPANFAVYT +V +GRIMGLDLPDGG
Sbjct: 145 SGSPANFAVYTAIVGSNGRIMGLDLPDGG 173
>U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical
protein F25B4.6 protein.
Length = 462
Score = 30.3 bits (65), Expect = 0.93
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 183 LEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQR--YYGGNEFIDEIEILAQNRSLETYK 356
+E+ +NF L+ ++ KY+ G+ Q+ + NE I I + + +ETYK
Sbjct: 19 IELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKLIETYK 78
Query: 357 LNPEEWG 377
++ + G
Sbjct: 79 ISTDSIG 85
>U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthase
protein.
Length = 458
Score = 30.3 bits (65), Expect = 0.93
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 183 LEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQR--YYGGNEFIDEIEILAQNRSLETYK 356
+E+ +NF L+ ++ KY+ G+ Q+ + NE I I + + +ETYK
Sbjct: 15 IELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKLIETYK 74
Query: 357 LNPEEWG 377
++ + G
Sbjct: 75 ISTDSIG 81
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 30.3 bits (65), Expect = 0.93
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +3
Query: 144 NLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNK 257
N + KEKK G + EN P QC S CL NK
Sbjct: 226 NKLKKEKKENNGGSDRNLDENSLFHPTFQC-SICLENK 262
>U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine
receptor, class w protein115 protein.
Length = 367
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 332 LCQYFYFINEFISAIVPLI 276
L +YFY N F+S IVP I
Sbjct: 215 LAKYFYLFNSFVSDIVPCI 233
>AF039049-2|AAB94252.2| 297|Caenorhabditis elegans Serpentine
receptor, class x protein67 protein.
Length = 297
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Frame = -1
Query: 356 LVCFQ*PILCQYFYFINEFISAIVPL---IWHTL--------*VFIVKT*TQAL*YRN*C 210
L C++ +L + IN F + +VPL IW T+ ++IV+T A+ Y+ C
Sbjct: 84 LFCYESSVLTHFCISINRFCAVLVPLKYDIWFTIKNTKKIIALLWIVETIIAAIFYQYLC 143
Query: 209 KVF 201
VF
Sbjct: 144 NVF 146
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 364 LKNGE*MFNRYSGSPANFAVYTGVVEPHGRIMGLDLPDGGPFD 492
L N + ++ Y G+P A Y V + + GLD G P++
Sbjct: 1243 LTNSDTIYYDYQGAPEGSACYQAVDDNQKKFYGLDERYGDPYN 1285
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 364 LKNGE*MFNRYSGSPANFAVYTGVVEPHGRIMGLDLPDGGPFD 492
L N + ++ Y G+P A Y V + + GLD G P++
Sbjct: 1243 LTNSDTIYYDYQGAPEGSACYQAVDDNQKKFYGLDERYGDPYN 1285
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 364 LKNGE*MFNRYSGSPANFAVYTGVVEPHGRIMGLDLPDGGPFD 492
L N + ++ Y G+P A Y V + + GLD G P++
Sbjct: 1243 LTNSDTIYYDYQGAPEGSACYQAVDDNQKKFYGLDERYGDPYN 1285
>AL132862-25|CAB60566.2| 60|Caenorhabditis elegans Hypothetical
protein Y73F8A.32 protein.
Length = 60
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2
Query: 370 SSGFSLYVSSDLFC 329
SSGFSLYV S LFC
Sbjct: 42 SSGFSLYVFSVLFC 55
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +3
Query: 135 ELFNLITKEKKRQQAGLEMI-ASENFTSVPV 224
ELF++ KEK + +A +E+I AS F +VP+
Sbjct: 1829 ELFSMSLKEKTKTRALIEIISASSEFGNVPM 1859
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,430,447
Number of Sequences: 27780
Number of extensions: 297566
Number of successful extensions: 669
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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