Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K18
(451 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 138 6e-33
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 138 6e-33
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 138 6e-33
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 138 6e-33
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 138 6e-33
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 137 2e-32
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 135 8e-32
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 79 7e-15
AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled recep... 35 0.15
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 29 7.3
J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human cartilage... 29 7.3
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 29 9.7
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 29 9.7
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 138 bits (335), Expect = 6e-33
Identities = 63/80 (78%), Positives = 74/80 (92%)
Frame = +3
Query: 210 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 389
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 390 IKHNGNITMEDVIGIAKIMR 449
IKH+GNIT ++++ IA+ MR
Sbjct: 98 IKHSGNITFDEIVNIARQMR 117
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 138 bits (335), Expect = 6e-33
Identities = 63/80 (78%), Positives = 74/80 (92%)
Frame = +3
Query: 210 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 389
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 390 IKHNGNITMEDVIGIAKIMR 449
IKH+GNIT ++++ IA+ MR
Sbjct: 98 IKHSGNITFDEIVNIARQMR 117
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 138 bits (335), Expect = 6e-33
Identities = 63/80 (78%), Positives = 74/80 (92%)
Frame = +3
Query: 210 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 389
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 390 IKHNGNITMEDVIGIAKIMR 449
IKH+GNIT ++++ IA+ MR
Sbjct: 98 IKHSGNITFDEIVNIARQMR 117
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 138 bits (335), Expect = 6e-33
Identities = 63/80 (78%), Positives = 74/80 (92%)
Frame = +3
Query: 210 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 389
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 390 IKHNGNITMEDVIGIAKIMR 449
IKH+GNIT ++++ IA+ MR
Sbjct: 98 IKHSGNITFDEIVNIARQMR 117
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 138 bits (335), Expect = 6e-33
Identities = 63/80 (78%), Positives = 74/80 (92%)
Frame = +3
Query: 210 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 389
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 390 IKHNGNITMEDVIGIAKIMR 449
IKH+GNIT ++++ IA+ MR
Sbjct: 98 IKHSGNITFDEIVNIARQMR 117
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 137 bits (331), Expect = 2e-32
Identities = 62/80 (77%), Positives = 73/80 (91%)
Frame = +3
Query: 210 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 389
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 70 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 129
Query: 390 IKHNGNITMEDVIGIAKIMR 449
IKH+GNIT ++++ I + MR
Sbjct: 130 IKHSGNITFDEIVNIVRQMR 149
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 135 bits (326), Expect = 8e-32
Identities = 61/80 (76%), Positives = 73/80 (91%)
Frame = +3
Query: 210 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 389
SPKKVGDDIAKAT DWKGL+ITV+L ++NRQAQI VVPSA+A II+ALK+PPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKN 97
Query: 390 IKHNGNITMEDVIGIAKIMR 449
IKHNGNIT ++++ IA+ MR
Sbjct: 98 IKHNGNITFDEIVNIARQMR 117
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 79.0 bits (186), Expect = 7e-15
Identities = 35/47 (74%), Positives = 43/47 (91%)
Frame = +3
Query: 309 ISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAKIMR 449
I VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNIT ++++ IA+ MR
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMR 84
>AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled receptor
protein.
Length = 915
Score = 34.7 bits (76), Expect = 0.15
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 234 IAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIR--ALKEPPRDRKKQ-KNIKHNG 404
I++ DWKG+ +T Q QI ++ A+L IR L EP + RK K I
Sbjct: 429 ISRKFIDWKGIPVTQVQSTQGYNYQIEMIQQNASLPIRGHVLIEPDQFRKSHPKTIISMA 488
Query: 405 NITMEDVIGIAK 440
++T D++ I +
Sbjct: 489 SLTFGDILPITQ 500
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 1 LPTRRVLPGGGWKEPATQDPMPVSLSRLL--RMLNKESRARPCDCH 132
+PT R P G W+EP P + R L R R+RP H
Sbjct: 555 MPTIRCQPSGHWEEPRITCTDPTTYKRRLQKRSSRHPRRSRPSTAH 600
>J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human
cartilage-specific proteoglycan core protein (CSPCP)
mRNA, 3' end. ).
Length = 480
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 1 LPTRRVLPGGGWKEPATQDPMPVSLSRLL--RMLNKESRARPCDCH 132
+PT R P G W+EP P + R L R R+RP H
Sbjct: 435 MPTIRCQPSGHWEEPRITCTDPTTYKRRLQKRSSRHPRRSRPSTAH 480
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 28.7 bits (61), Expect = 9.7
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 261 PSSH*WL*RCHHQPFLGT 208
PSSH +CHHQPFL T
Sbjct: 85 PSSHPLPWQCHHQPFLET 102
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 28.7 bits (61), Expect = 9.7
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 261 PSSH*WL*RCHHQPFLGT 208
PSSH +CHHQPFL T
Sbjct: 85 PSSHPLPWQCHHQPFLET 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,667,564
Number of Sequences: 237096
Number of extensions: 1306606
Number of successful extensions: 6989
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6989
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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