Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K18
         (451 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical pr...   126   7e-30
Z81486-10|CAB03993.3|  681|Caenorhabditis elegans Hypothetical p...    28   2.7  
Z48230-4|CAO78721.1|  484|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z48230-3|CAA88263.1|  515|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z48006-7|CAO78729.1|  484|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z48006-6|CAA88051.1|  515|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z50794-8|CAA90655.2|  450|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z49937-9|CAO78727.1|  450|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical
           protein JC8.3a protein.
          Length = 165

 Score =  126 bits (304), Expect = 7e-30
 Identities = 55/80 (68%), Positives = 71/80 (88%)
 Frame = +3

Query: 210 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 389
           SPKK+G+DIAKAT DWKGLK+T +L +QNR A+I VVPSAA+LI++ LKEPPRDRKK KN
Sbjct: 38  SPKKIGEDIAKATQDWKGLKVTCKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKN 97

Query: 390 IKHNGNITMEDVIGIAKIMR 449
           +KHNG++T++ +I IA+IMR
Sbjct: 98  VKHNGDLTVDTIIKIARIMR 117


>Z81486-10|CAB03993.3|  681|Caenorhabditis elegans Hypothetical
           protein C53A5.13 protein.
          Length = 681

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -1

Query: 415 IVIFPLCLMFFCFLRS 368
           +VIF +CL+ FCFLR+
Sbjct: 613 LVIFLMCLLVFCFLRN 628


>Z48230-4|CAO78721.1|  484|Caenorhabditis elegans Hypothetical
           protein F19C6.4b protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 138 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSD 254
           PAN    YL+N    VI  N  +Q  K + D I   T +
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE 333


>Z48230-3|CAA88263.1|  515|Caenorhabditis elegans Hypothetical
           protein F19C6.4a protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 138 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSD 254
           PAN    YL+N    VI  N  +Q  K + D I   T +
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE 333


>Z48006-7|CAO78729.1|  484|Caenorhabditis elegans Hypothetical
           protein F19C6.4b protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 138 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSD 254
           PAN    YL+N    VI  N  +Q  K + D I   T +
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE 333


>Z48006-6|CAA88051.1|  515|Caenorhabditis elegans Hypothetical
           protein F19C6.4a protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 138 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSD 254
           PAN    YL+N    VI  N  +Q  K + D I   T +
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE 333


>Z50794-8|CAA90655.2|  450|Caenorhabditis elegans Hypothetical
           protein F59F5.1 protein.
          Length = 450

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 442 ILAMPMTSSIVIFPLCLMFF 383
           +L +PM SS+++ P C +F+
Sbjct: 79  VLVVPMASSLILGPFCSIFY 98


>Z49937-9|CAO78727.1|  450|Caenorhabditis elegans Hypothetical
           protein F59F5.1 protein.
          Length = 450

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 442 ILAMPMTSSIVIFPLCLMFF 383
           +L +PM SS+++ P C +F+
Sbjct: 79  VLVVPMASSLILGPFCSIFY 98


>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical
           protein ZK675.1 protein.
          Length = 1405

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 295 FCTINWTVILRPFQSLVALAMSSPTFFGDC 206
           FC  N+T+IL  +  ++A A+ +   F +C
Sbjct: 647 FCQFNYTIILAGYALMLAYAIVTQARFDNC 676


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,226,355
Number of Sequences: 27780
Number of extensions: 188917
Number of successful extensions: 364
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)