Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K16
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.40 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   5.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 24.6 bits (51), Expect = 0.40
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 384 NLVSALPSSDRPVAYPARTFHDALS 310
           +LV  + +SD  +AYP  +FH   S
Sbjct: 10  DLVLTIEASDAVLAYPQPSFHQTFS 34


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 291 SIHSEVPTKRHGKFEQDRPP 350
           SI  E  TK HG   + RPP
Sbjct: 67  SIIDEAATKVHGTTVRVRPP 86


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 291 SIHSEVPTKRHGKFEQDRPP 350
           SI  E  TK HG   + RPP
Sbjct: 381 SIIDEAATKVHGTTVRVRPP 400


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 291 SIHSEVPTKRHGKFEQDRPP 350
           SI  E  TK HG   + RPP
Sbjct: 614 SIIDEAATKVHGTTVRVRPP 633


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 291 SIHSEVPTKRHGKFEQDRPP 350
           SI  E  TK HG   + RPP
Sbjct: 614 SIIDEAATKVHGTTVRVRPP 633


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,579
Number of Sequences: 336
Number of extensions: 1930
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)