Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K15
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   0.91 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   1.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   1.6  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   2.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   8.5  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 338 PSVTSRKTIFGTGSEWWLLHMTHMSFATSTSMLIATMKTT 457
           P+ T ++T +     W+L H       T+T  L    +TT
Sbjct: 220 PTFTQQQTQYSQYGSWFLPHQPIYPAVTATVQLSTCTRTT 259


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 140 FKANLPLGTFAAILPPFTPFLPVF 69
           FK  + LG F   L PF P  P +
Sbjct: 190 FKRTIALGAFYQPLQPFPPPYPFY 213


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 487 NYFIYKQLNPRCLHCRYQ 434
           N  I K+   RC +CRYQ
Sbjct: 127 NCIIDKRQRNRCQYCRYQ 144


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 210 KERVKVEGKTNNLGNHVVIARDKTKVAINAEHSLLK 317
           ++ VK+    NN+    V+AR+  K+ +    S+LK
Sbjct: 50  RDSVKLSKIPNNVNLMDVVAREFDKIQVGDVSSVLK 85


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = -3

Query: 255 DCPGYLFCLQL*HVLSSISQSCQHPGCYP-QQGVCS 151
           DC  Y  C+     L SI + C H   Y  +  +C+
Sbjct: 454 DCSVYYTCVSDGSKLVSIQRKCNHGLVYDLELNICN 489


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 421 SSEAHMSHVQKPPLGASPEDCF 356
           SSE     V+K P  AS  +CF
Sbjct: 160 SSERDYFSVKKLPSPASDSECF 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,768
Number of Sequences: 336
Number of extensions: 2183
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)