Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K15
(512 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58760-2|AAK31460.1| 130|Caenorhabditis elegans Ribosomal prote... 59 2e-09
U58760-3|AAL02443.1| 53|Caenorhabditis elegans Ribosomal prote... 32 0.21
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 29 2.0
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 29 2.0
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 2.0
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 2.0
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 2.0
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 2.0
AC006830-3|AAP13735.1| 348|Caenorhabditis elegans Serpentine re... 29 2.0
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 28 3.4
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 28 3.4
Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical pr... 27 6.0
U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U58760-2|AAK31460.1| 130|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 22, isoform a protein.
Length = 130
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +3
Query: 120 KRKISLKFTIDCTHPAEDSILDVGNFEKYLKERVKVEGKTNNL-GNHVVIARDKTKVAIN 296
K+K+ LKF ++C +P ED IL + + E +L E++KV GKT +L N+V + K+KV++
Sbjct: 16 KKKVHLKFNVECKNPVEDGILRIEDLEAFLNEKIKVNGKTGHLAANNVKVEVAKSKVSVV 75
Query: 297 AE 302
+E
Sbjct: 76 SE 77
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 277 RQKSLSTQNIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDSYELRYF 423
+ K +PFS DWLRVVA ++YE+RYF
Sbjct: 69 KSKVSVVSEVPFSKRYLKYLTKKYLKRNSLRDWLRVVAVNKNTYEVRYF 117
>U58760-3|AAL02443.1| 53|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 22, isoform b protein.
Length = 53
Score = 32.3 bits (70), Expect = 0.21
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 120 KRKISLKFTIDCTHPAEDSILDV 188
K+K+ LKF ++C +P ED IL +
Sbjct: 16 KKKVHLKFNVECKNPVEDGILRI 38
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 207 LKERV-KVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEKQSSGL 374
LK RV K+ G+T + + RD+ + H L +S +L + P+ +S L
Sbjct: 4175 LKHRVEKISGRTAERAKQLAVTRDEVATWQDGLHDLEHFISDVLVKIAPEPNTTSSL 4231
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 207 LKERV-KVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEKQSSGL 374
LK RV K+ G+T + + RD+ + H L +S +L + P+ +S L
Sbjct: 4175 LKHRVEKISGRTAERAKQLAVTRDEVATWQDGLHDLEHFISDVLVKIAPEPNTTSSL 4231
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 207 LKERV-KVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEKQSSGL 374
LK RV K+ G+T + + RD+ + H L +S +L + P+ +S L
Sbjct: 3630 LKHRVEKISGRTAERAKQLAVTRDEVATWQDGLHDLEHFISDVLVKIAPEPNTTSSL 3686
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 207 LKERV-KVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEKQSSGL 374
LK RV K+ G+T + + RD+ + H L +S +L + P+ +S L
Sbjct: 4175 LKHRVEKISGRTAERAKQLAVTRDEVATWQDGLHDLEHFISDVLVKIAPEPNTTSSL 4231
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 207 LKERV-KVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEKQSSGL 374
LK RV K+ G+T + + RD+ + H L +S +L + P+ +S L
Sbjct: 4175 LKHRVEKISGRTAERAKQLAVTRDEVATWQDGLHDLEHFISDVLVKIAPEPNTTSSL 4231
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 207 LKERV-KVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEKQSSGL 374
LK RV K+ G+T + + RD+ + H L +S +L + P+ +S L
Sbjct: 3630 LKHRVEKISGRTAERAKQLAVTRDEVATWQDGLHDLEHFISDVLVKIAPEPNTTSSL 3686
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 213 ERVKVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEK 359
+ V EG G+ + RD+ +AE LKE+ I D LP+E+
Sbjct: 723 KNVPPEGIRITTGDADGVLRDRVAAQQDAEDKWLKELEAIFDTRLPEEE 771
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 213 ERVKVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEK 359
+ V EG G+ + RD+ +AE LKE+ I D LP+E+
Sbjct: 723 KNVPPEGIRITTGDADGVLRDRVAAQQDAEDKWLKELEAIFDTRLPEEE 771
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 207 LKERV-KVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEKQSSGL 374
LK RV K+ G+T + + RD+ + H L +S +L + P+ +S L
Sbjct: 4175 LKHRVEKISGRTAERAKQLAVTRDEVATWQDGLHDLEHFISDVLVKIAPEPNTTSSL 4231
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 207 LKERV-KVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEKQSSGL 374
LK RV K+ G+T + + RD+ + H L +S +L + P+ +S L
Sbjct: 4175 LKHRVEKISGRTAERAKQLAVTRDEVATWQDGLHDLEHFISDVLVKIAPEPNTTSSL 4231
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 207 LKERV-KVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEKQSSGL 374
LK RV K+ G+T + + RD+ + H L +S +L + P+ +S L
Sbjct: 3630 LKHRVEKISGRTAERAKQLAVTRDEVATWQDGLHDLEHFISDVLVKIAPEPNTTSSL 3686
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 207 LKERV-KVEGKTNNLGNHVVIARDKTKVAINAEHSLLKEVSQILDQALPQEKQSSGL 374
LK RV K+ G+T + + RD+ + H L +S +L + P+ +S L
Sbjct: 4175 LKHRVEKISGRTAERAKQLAVTRDEVATWQDGLHDLEHFISDVLVKIAPEPNTTSSL 4231
>AC006830-3|AAP13735.1| 348|Caenorhabditis elegans Serpentine
receptor, class w protein3 protein.
Length = 348
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 152 VNGKFKANLPLGTFAAILPPFTPFLPVFWCNWPFF 48
VNG N+PL T + ++P F LPV + FF
Sbjct: 275 VNGFSYGNVPLRTLSVMIPVFAEILPVMNSSSHFF 309
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 96 WQNRGKGAKRKISLKFTIDCTHPAEDSILDVGNFEKYLKERVKVEGKTNNLGNHVVIARD 275
++ R + ++R + + ++ T ED DV F + L+ER+K + NL +V +
Sbjct: 522 YRRRIEESQRLEAERLALEATMVDEDE--DVAKFIRNLEERIKDSRDSKNLNGALVGRQI 579
Query: 276 KTKVAINAEH 305
+A NAE+
Sbjct: 580 NQSLAKNAEN 589
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 96 WQNRGKGAKRKISLKFTIDCTHPAEDSILDVGNFEKYLKERVKVEGKTNNLGNHVVIARD 275
++ R + ++R + + ++ T ED DV F + L+ER+K + NL +V +
Sbjct: 522 YRRRIEESQRLEAERLALEATMVDEDE--DVAKFIRNLEERIKDSRDSKNLNGALVGRQI 579
Query: 276 KTKVAINAEH 305
+A NAE+
Sbjct: 580 NQSLAKNAEN 589
>Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical
protein F58B3.5 protein.
Length = 917
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 24 GSYKEARRKERPVTPEDW*ERSKRWQNRGKGAKRKISLKFTID 152
G EA +KE P TP + + Q +GKG + TID
Sbjct: 714 GIITEAPKKEAPSTPAPSEPKKAKEQKKGKGGAAAAPVDDTID 756
>U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical
protein R151.1 protein.
Length = 377
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = -3
Query: 489 KTILFINSLILVVFIVAISIDVEVAKLI*VMCRSHHSEPVPK 364
KT + + S ILV+F++ ++ + +I ++C + + K
Sbjct: 266 KTTMLMESSILVIFLIVVACMSPICTMIVLLCLRRRKKEIKK 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,853,910
Number of Sequences: 27780
Number of extensions: 216330
Number of successful extensions: 622
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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