Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K14
(613 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 39 5e-04
SPCC24B10.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 33 0.043
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.099
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 31 0.13
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 29 0.40
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.40
SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomy... 28 1.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.1
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 27 2.8
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 27 2.8
SPAC6G10.06 |||amino acid oxidase |Schizosaccharomyces pombe|chr... 26 3.7
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 6.5
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 25 6.5
SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces ... 25 6.5
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 25 8.6
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 25 8.6
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 156 SEFSIENLVAFAKDLIGGKLEPFVKSEAVPESNDGPVKVAVGKNFKELV 302
+E + + + F D + GKL+P +KS+ +PES + V V V NF ++V
Sbjct: 322 TELTAKAMTKFVGDFVDGKLQPKIKSQPIPESQEDLV-VLVADNFDDIV 369
>SPCC24B10.06 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 156
Score = 32.7 bits (71), Expect = 0.043
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 346 MFGKIVFLLLVALCVGVQSRYLIVSEPVYYIQHYEEPELLTSSRV 480
MFGK+ LL+ A + +Q + + P+ ++H E ELL ++RV
Sbjct: 1 MFGKVSSLLVFASFLIIQGAFATLVAPIGDLEHLSEIELLYTNRV 45
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.5 bits (68), Expect = 0.099
Identities = 31/101 (30%), Positives = 47/101 (46%)
Frame = -1
Query: 337 TETGHLRPRLPVTSSLKFLPTATLTGPSLLSGTASDLTKGSSLPPMRSFAKATRFSMLNS 158
+ T L +PVTSS+ P T TG S T+S + G+ S+ T S + S
Sbjct: 886 SSTTSLSTSIPVTSSV--APAVTSTG----SETSSVVGSGTDSATSSSWTAETSSSAITS 939
Query: 157 DFMTYLFPSTSRPATTGLSPLEKSIPNSFNSWTKSSLSLMA 35
+ P++S A++ S E P++ S T SS S +A
Sbjct: 940 SVAASVTPTSSSSASSWSSSSEVD-PSTAASATGSSTSSIA 979
Score = 31.1 bits (67), Expect = 0.13
Identities = 28/97 (28%), Positives = 44/97 (45%)
Frame = -1
Query: 316 PRLPVTSSLKFLPTATLTGPSLLSGTASDLTKGSSLPPMRSFAKATRFSMLNSDFMTYLF 137
P V SS +PT++ + S T S SS+P S + S +S T L
Sbjct: 534 PMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLS 593
Query: 136 PSTSRPATTGLSPLEKSIPNSFNSWTKSSLSLMAKFT 26
S+S ++T S S P+S +S SS ++++ T
Sbjct: 594 ISSSSTSST-FSSASTSSPSSISSSISSSSTILSSPT 629
Score = 27.9 bits (59), Expect = 1.2
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Frame = -1
Query: 310 LPVTSSLKFLPTATLTGPSLLSGTASDLTKGSSLPPMRSFAKATRFSMLNSDFMTYLFPS 131
+P++SSL ++ + S L ++S L SS S + S L S + L
Sbjct: 657 IPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLSNI 716
Query: 130 TSRPATTGLSPLEKSIPNSFNSWT----KSSLSLMAKFT 26
T + +IP S NS T SS +L++ T
Sbjct: 717 THSSLSLTAMSSSSAIPTSVNSSTLITASSSNTLLSSIT 755
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 31.1 bits (67), Expect = 0.13
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = -1
Query: 271 TLTGPSLLSGTASDLTKGSSLPPMRSFAKATRFSMLNSDFMTYLFPSTSRPATTGLSP 98
T P + S A +S+ + ++ATR S+ +S F +YL P+ SR ++G +P
Sbjct: 140 TQDSPRVSSTIAYSFKPKASIALNTTKSEATRSSLSSSSFDSYLRPNVSRSRSSGNAP 197
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.5 bits (63), Expect = 0.40
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Frame = -1
Query: 277 TATLTGPSLLSGTASDLTKGSSLPPMRSFAKATRF--SMLNSDFMT----YLFPSTSRPA 116
T++L+ PS + + DL G +++ K+ + S+LNS F+T ++PST +P
Sbjct: 758 TSSLSSPSHSTSSKRDLLSGLESLSLKTNPKSEQCLESLLNSQFITDFSALVYPSTIKPP 817
Query: 115 TT 110
+T
Sbjct: 818 ST 819
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.5 bits (63), Expect = 0.40
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -1
Query: 301 TSSLKFLPTATLTGPSLLSGTASDLTKGSSL--PPMRSFAKATRFSMLNSDFMTYLFPST 128
+SSL +AT T SL S AS+ SSL + S AT S S ++ P T
Sbjct: 197 SSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLT 256
Query: 127 SRPATTGLSPLEKSIPNSFNSWTKSSL 47
S +TT + S +S + SSL
Sbjct: 257 SSNSTTAAT--SASATSSSAQYNTSSL 281
>SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 347 CSGRSSFYCLSLCASAFKAD 406
C G SSFYCLS+ +K D
Sbjct: 132 CQGYSSFYCLSIFDRYYKPD 151
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 163 NSDFM-TYLFPSTSRPATTGLSPLEKSIPNS 74
N+DF+ YL S P +T P+ SIP+S
Sbjct: 209 NADFVKAYLNESAGTPTSTSAPPIPPSIPSS 239
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 301 TSSLKFLPTATLTGPSLLSGTASDLTKGSSLPPMRS 194
TS++ F+P + ++G +L+ +SDL K P + S
Sbjct: 354 TSNVHFVPISAISGTNLIQKDSSDLYKWYKGPTLLS 389
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 157 DFMTYLFPSTSRPATTGLSPLEKSIPNSFNSWTKSSLS 44
DF+ F S + +SPL+ +IPNS ++ T L+
Sbjct: 1515 DFLIDCFMSLYNEVKSSISPLDANIPNSPSTITAKPLN 1552
>SPAC6G10.06 |||amino acid oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 376
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 298 SSLKFLPTATLTGPSLLSGTAS 233
+S KFLPT+ +TG ++S T S
Sbjct: 309 ASFKFLPTSRITGIPIISTTKS 330
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 310 GVDGDDRFQYTNMFGKIVFLLLVALCVGVQSRYLIVSEP 426
GV R +TNMF +F+ L+ + + + S + I S+P
Sbjct: 1584 GVIDTSRAHFTNMFFTEIFIPLMLVPLTLVSYFFIDSQP 1622
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 163 NSDFMTYLFPSTSRPATTGLSPLEKSIPNSFN 68
+SD T LFP+ S PA+T L +I S N
Sbjct: 134 SSDNETPLFPNNSPPASTTALNLSSNIVPSIN 165
>SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 761
Score = 25.4 bits (53), Expect = 6.5
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -1
Query: 268 LTGPSLLSGTASDLTKGSSLPPMRSFAKATRFSMLNSDFMTYLFPSTSRPA 116
LT PSL S S+ S+ P F+ A S++N D + STS PA
Sbjct: 307 LTTPSLYSQRLSN-NYDSTTPGFPRFSPANFDSVINKDVTSESRMSTSYPA 356
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 8.6
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = -1
Query: 220 GSSLPPMRSFAKATRFSMLNSDFMTYLFPSTSRPATTGLSPLEKSIPNSFNSWTKSSLSL 41
GS +P + N+D + + R ++ L + K+IP+ + T+ LS
Sbjct: 929 GSGVPQTTLITAYQLLKVFNTDSNDLVRECSIRASSVSLGSIAKTIPSVLTAQTRILLSY 988
Query: 40 MAKFTLDISFATL 2
M DI L
Sbjct: 989 MLLPECDIDVQLL 1001
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 48 KDDFVHELNEFGIDFSKGDKPVVAGRDVDGNKYVMKSEFSIENLV 182
+DD V+E EF D S VV+ D D Y + +IE +V
Sbjct: 1861 EDDGVYEEMEFEDDQSGSADSVVSEDDADDVMYSDNDDMNIEFMV 1905
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,331,007
Number of Sequences: 5004
Number of extensions: 47292
Number of successful extensions: 210
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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