Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K13
         (490 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81515-10|CAH60782.1|  413|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81515-8|CAB54234.3|  692|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81515-7|CAB04195.1|  510|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81515-6|CAB04198.1|  405|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z12017-8|CAA78050.3|  371|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF016446-6|AAC24162.1|  322|Caenorhabditis elegans Serpentine re...    27   9.7  

>Z81515-10|CAH60782.1|  413|Caenorhabditis elegans Hypothetical
           protein F26H11.2g protein.
          Length = 413

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = -3

Query: 257 TGGGDDPEDGAVHINLQHLLSERKLFIFARMKTKCFLCSTQYH 129
           T G   P D  ++++++H   + K+F  +++  +C LC+  YH
Sbjct: 105 TPGSATPHD--INLSIEHCTCQ-KIFDASKLYIQCELCARWYH 144


>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
            F26H11.2c protein.
          Length = 2266

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = -3

Query: 257  TGGGDDPEDGAVHINLQHLLSERKLFIFARMKTKCFLCSTQYH 129
            T G   P D  ++++++H   + K+F  +++  +C LC+  YH
Sbjct: 1958 TPGSATPHD--INLSIEHCTCQ-KIFDASKLYIQCELCARWYH 1997


>Z81515-8|CAB54234.3|  692|Caenorhabditis elegans Hypothetical
           protein F26H11.2d protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = -3

Query: 257 TGGGDDPEDGAVHINLQHLLSERKLFIFARMKTKCFLCSTQYH 129
           T G   P D  ++++++H   + K+F  +++  +C LC+  YH
Sbjct: 384 TPGSATPHD--INLSIEHCTCQ-KIFDASKLYIQCELCARWYH 423


>Z81515-7|CAB04195.1|  510|Caenorhabditis elegans Hypothetical
           protein F26H11.2f protein.
          Length = 510

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = -3

Query: 257 TGGGDDPEDGAVHINLQHLLSERKLFIFARMKTKCFLCSTQYH 129
           T G   P D  ++++++H   + K+F  +++  +C LC+  YH
Sbjct: 202 TPGSATPHD--INLSIEHCTCQ-KIFDASKLYIQCELCARWYH 241


>Z81515-6|CAB04198.1|  405|Caenorhabditis elegans Hypothetical
           protein F26H11.2e protein.
          Length = 405

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = -3

Query: 257 TGGGDDPEDGAVHINLQHLLSERKLFIFARMKTKCFLCSTQYH 129
           T G   P D  ++++++H   + K+F  +++  +C LC+  YH
Sbjct: 97  TPGSATPHD--INLSIEHCTCQ-KIFDASKLYIQCELCARWYH 136


>Z12017-8|CAA78050.3|  371|Caenorhabditis elegans Hypothetical
           protein R08D7.4 protein.
          Length = 371

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +2

Query: 233 PQDHLRLLLEACLKDSDHL-NFRKQFLCGRKSTS--LKMKFQISFLLN*LKDLE 385
           P   ++ ++E C+KDS++  N           TS  ++ KFQI+ L N + +L+
Sbjct: 57  PDQLMKDIVEQCIKDSEYAENLCNNVFNNEIVTSHEIRYKFQINVLKNLISELQ 110


>AF016446-6|AAC24162.1|  322|Caenorhabditis elegans Serpentine
           receptor, class h protein20 protein.
          Length = 322

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -3

Query: 152 FLCSTQYHYISSSV*GMYCHRLLKSILETVQLKRIVSVQ 36
           F+C T + + S+    ++   L   ILET++LK+  S+Q
Sbjct: 277 FICLTYHGFASTLALIIFTKPLRNYILETLKLKKTSSIQ 315


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,939,013
Number of Sequences: 27780
Number of extensions: 217753
Number of successful extensions: 464
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)