Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K09
         (427 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87443-1|BAA13384.2| 1009|Homo sapiens KIAA0254 protein.               29   8.7  
BC031620-1|AAH31620.1|  803|Homo sapiens SNX19 protein protein.        29   8.7  
AF395843-1|AAK73124.1|  992|Homo sapiens SNX19 protein.                29   8.7  

>D87443-1|BAA13384.2| 1009|Homo sapiens KIAA0254 protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 369 LVLKSLIFMRHLLPTTGERVVVSLGWIIGMIEIDERRSSAYWVHNFRLGPF 217
           L+L+ L+   HL   TG  VVV L     ++ +  R S   W+H   +G F
Sbjct: 235 LLLQGLVPKPHLETRTGRHVVVELITCNVILPLISRLSDPDWIHLVLVGIF 285


>BC031620-1|AAH31620.1|  803|Homo sapiens SNX19 protein protein.
          Length = 803

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 369 LVLKSLIFMRHLLPTTGERVVVSLGWIIGMIEIDERRSSAYWVHNFRLGPF 217
           L+L+ L+   HL   TG  VVV L     ++ +  R S   W+H   +G F
Sbjct: 218 LLLQGLVPKPHLETRTGRHVVVELITCNVILPLISRLSDPDWIHLVLVGIF 268


>AF395843-1|AAK73124.1|  992|Homo sapiens SNX19 protein.
          Length = 992

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 369 LVLKSLIFMRHLLPTTGERVVVSLGWIIGMIEIDERRSSAYWVHNFRLGPF 217
           L+L+ L+   HL   TG  VVV L     ++ +  R S   W+H   +G F
Sbjct: 218 LLLQGLVPKPHLETRTGRHVVVELITCNVILPLISRLSDPDWIHLVLVGIF 268


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,390,664
Number of Sequences: 237096
Number of extensions: 1648740
Number of successful extensions: 3120
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3115
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)