Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K09
         (427 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.8  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   7.6  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   7.6  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   7.6  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   7.6  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   7.6  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   7.6  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.6  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   7.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.6  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 80  RVHVVDHNPDYNPGQVHV 133
           R + +  +PD + GQ+H+
Sbjct: 897 RFYSISSSPDVHQGQIHL 914


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 192 RILSSLNHQTVLGGNYE 242
           +I+SSL++ T+   NY+
Sbjct: 79  KIISSLSNNTIHNNNYK 95


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 192 RILSSLNHQTVLGGNYE 242
           +I+SSL++ T+   NY+
Sbjct: 79  KIISSLSNNTIHNNNYK 95


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 192 RILSSLNHQTVLGGNYE 242
           +I+SSL++ T+   NY+
Sbjct: 80  KIISSLSNNTIHNNNYK 96


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 192 RILSSLNHQTVLGGNYE 242
           +I+SSL++ T+   NY+
Sbjct: 80  KIISSLSNNTIHNNNYK 96


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 192 RILSSLNHQTVLGGNYE 242
           +I+SSL++ T+   NY+
Sbjct: 80  KIISSLSNNTIHNNNYK 96


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 192 RILSSLNHQTVLGGNYE 242
           +I+SSL++ T+   NY+
Sbjct: 80  KIISSLSNNTIHNNNYK 96


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 268 VDFNHPNYPPKRY 306
           +D NHP +  K Y
Sbjct: 195 LDMNHPGFADKEY 207


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 192 RILSSLNHQTVLGGNYEPSKHW 257
           +I+SSL++ T+   NY    ++
Sbjct: 313 KIISSLSNNTIHNNNYNKKLYY 334


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 268 RTPVQCLLGS*FPPRTV*WLRE 203
           RT   C + +  PP T+ WL++
Sbjct: 627 RTRTVCGVAAGDPPLTISWLKD 648


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,314
Number of Sequences: 438
Number of extensions: 3062
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)