Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K08
(409 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 107 3e-24
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 76 9e-15
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 69 1e-12
07_03_1306 - 25643469-25643609,25644008-25644169,25644496-256446... 69 1e-12
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 69 1e-12
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 69 2e-12
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 67 6e-12
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 58 4e-09
10_01_0343 - 3773274-3773390,3773476-3773637,3773758-3773853,377... 55 2e-08
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 31 0.35
01_07_0106 - 41107673-41107942,41108362-41108574,41108877-411090... 28 3.3
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 27 4.3
03_02_0199 - 6347980-6348225,6348300-6348341,6348824-6348978,634... 27 5.7
01_05_0345 + 21181114-21181222,21181306-21181367,21181505-211815... 27 7.6
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 107 bits (257), Expect = 3e-24
Identities = 48/91 (52%), Positives = 63/91 (69%)
Frame = -3
Query: 407 CHKXXXXXXXXXXXXXGEEISTRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLP 228
CHK G+EISTRPFQLVTGR WKG+AFGG+KSR VP LV++YL ++
Sbjct: 287 CHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIK 346
Query: 227 LDEFVTHNFQLKEINEAFHLMHIGKSIRAVV 135
+DE+VTH+ L +IN+AF L+H G +R V+
Sbjct: 347 VDEYVTHSMNLTDINKAFDLLHEGGCLRCVL 377
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 76.2 bits (179), Expect = 9e-15
Identities = 32/77 (41%), Positives = 48/77 (62%)
Frame = -3
Query: 353 EISTRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEAF 174
E T P + RT KG+ FG YK R +P +V+ Y+K +L +++F+TH+ EIN AF
Sbjct: 303 EFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAF 362
Query: 173 HLMHIGKSIRAVVHL*N 123
LMH G+ IR ++ + N
Sbjct: 363 DLMHKGEGIRCIIRMEN 379
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/72 (41%), Positives = 46/72 (63%)
Frame = -3
Query: 344 TRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEAFHLM 165
T P + +T KG+ FG YK R +P +V+ Y+K +L L++F+TH+ EIN AF LM
Sbjct: 306 THPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLM 365
Query: 164 HIGKSIRAVVHL 129
G+S+R V+ +
Sbjct: 366 LKGESLRCVMRM 377
>07_03_1306 -
25643469-25643609,25644008-25644169,25644496-25644659,
25645117-25645192,25645569-25645651,25646393-25646669
Length = 300
Score = 69.3 bits (162), Expect = 1e-12
Identities = 31/72 (43%), Positives = 46/72 (63%)
Frame = -3
Query: 350 ISTRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEAFH 171
IS +++ GR+ GS FGG K ++ +P L +YL +L L+EF+TH +EIN AF
Sbjct: 217 ISIPSHEILRGRSVIGSLFGGIKPKNDIPMLAQKYLDKELELEEFITHEMGFEEINRAFE 276
Query: 170 LMHIGKSIRAVV 135
L+ GKSIR ++
Sbjct: 277 LLTQGKSIRCII 288
>02_05_0070 - 25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 68.9 bits (161), Expect = 1e-12
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = -3
Query: 353 EISTRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEAF 174
E+S L++GRT KGS FGG++ + +P LVD+Y ++ +D+ VTH+ IN+A
Sbjct: 918 EVSAHYALLLSGRTLKGSLFGGWRPKSDLPLLVDKYANKEIQVDDLVTHDLSFDYINKAL 977
Query: 173 HLMHIGKSIRAVVHL 129
LM K +R V+H+
Sbjct: 978 ELMLENKCLRCVIHM 992
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 68.5 bits (160), Expect = 2e-12
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = -3
Query: 350 ISTRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEAFH 171
+S +++ G+ GS FGG K + +P L D+YL +L LD+F+TH LK+IN AF
Sbjct: 231 LSIPSLEILNGKCVMGSLFGGVKPKQDIPILADKYLNKELELDKFITHEVPLKDINTAFD 290
Query: 170 LMHIGKSIRAVV 135
L+ GKS+R +
Sbjct: 291 LLLQGKSLRCTI 302
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 66.9 bits (156), Expect = 6e-12
Identities = 28/72 (38%), Positives = 45/72 (62%)
Frame = -3
Query: 344 TRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEAFHLM 165
T P + RT +G+ FG YK R +P +V+ Y+ +L L++F+TH+ EIN AF LM
Sbjct: 307 THPTNFLNERTLRGTFFGNYKPRTDLPGVVEMYMNKELELEKFITHSVPFSEINTAFDLM 366
Query: 164 HIGKSIRAVVHL 129
G+S+R ++ +
Sbjct: 367 LSGESLRCIIRM 378
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 57.6 bits (133), Expect = 4e-09
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = -3
Query: 335 FQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEAFHLMHIG 156
F+ + G+ GS FGG K + +P L ++ + +L L++ VTH L EIN AF L+ G
Sbjct: 290 FEFLFGKCVMGSLFGGAKPKTDIPILAEKCMNKELELEKLVTHEVGLTEINTAFDLLLQG 349
Query: 155 KSIRAVV 135
KS+R ++
Sbjct: 350 KSLRCII 356
>10_01_0343 -
3773274-3773390,3773476-3773637,3773758-3773853,
3773956-3774009
Length = 142
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = -3
Query: 338 PFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPL--DEFVTHNFQLKEINEAFHLM 165
P +L GR G FG +K + +P++V++ ++ ++ + D F+T +IN+AF L+
Sbjct: 71 PMELFDGRRITGCVFGDFKGKSQLPEIVEKCMQGEININFDGFITQELPFADINKAFQLL 130
Query: 164 HIGKSIRAVVHL 129
GKS+R ++H+
Sbjct: 131 EEGKSLRCLLHV 142
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 289 PPKADPFHVRPVTSWKGRVLISSPAPATPI 378
PP P R T W+G V ++PAP TP+
Sbjct: 46 PPVRRPSGDRACTPWRGGVGAAAPAPVTPV 75
>01_07_0106 -
41107673-41107942,41108362-41108574,41108877-41109041,
41109431-41109649,41110205-41110324,41110427-41110489,
41111034-41111606,41111691-41111858,41112414-41112495,
41112667-41112743,41113031-41113101,41114315-41114363
Length = 689
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 304 PFHVRPV--TSWKGRVLIS-SPAPATPIMTEIPQPL 402
P H+ PV TS+ V SP TPI+ E+P PL
Sbjct: 239 PVHISPVRETSFLREVPAPVSPVKETPILREVPTPL 274
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 346 LISSPAPATPIMTEIPQP 399
L+SSPAP TP+ + P P
Sbjct: 204 LVSSPAPGTPVTPQPPPP 221
>03_02_0199 - 6347980-6348225,6348300-6348341,6348824-6348978,
6349369-6349475,6349608-6349733,6349809-6349890,
6350057-6350130,6351184-6352631,6353391-6353540,
6353664-6353906,6354009-6354266,6355554-6356015
Length = 1130
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 201 PVERDQ*SFPLDAYWKVNPCCCTLVKFCKTYISEHLNMLYHC 76
P + D F LDA +N LVK C T IS + ++ HC
Sbjct: 1013 PDDPDTPYFSLDACCFINDIQEVLVKLCPTKISCDIIVVDHC 1054
>01_05_0345 +
21181114-21181222,21181306-21181367,21181505-21181588,
21182069-21182123,21182843-21182969,21183129-21183179,
21183275-21183374
Length = 195
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 387 LCHYWSCWSW*GNQHSSLPACYWSY 313
L H W W W S L A +W+Y
Sbjct: 118 LLHSWKKWMWYSFYVSILVALFWTY 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,060,814
Number of Sequences: 37544
Number of extensions: 158828
Number of successful extensions: 468
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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