Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K08
(409 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 109 1e-24
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 109 1e-24
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 109 1e-24
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 101 3e-22
Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical pr... 28 3.0
U39648-8|AAK39291.1| 270|Caenorhabditis elegans Beta carbonic a... 28 3.0
U39648-7|AAM15604.1| 429|Caenorhabditis elegans Beta carbonic a... 28 3.0
AL032655-7|CAH60798.1| 329|Caenorhabditis elegans Hypothetical ... 27 3.9
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 26 9.1
CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical ... 26 9.1
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 109 bits (261), Expect = 1e-24
Identities = 45/74 (60%), Positives = 64/74 (86%)
Frame = -3
Query: 356 EEISTRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEA 177
+EI+TRPFQLVTGRTWKG+AFGG+KS +SVP+LVD+Y+ KL +DEF+TH + + +IN A
Sbjct: 306 QEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTA 365
Query: 176 FHLMHIGKSIRAVV 135
F ++H G+S+R+V+
Sbjct: 366 FDVLHKGESLRSVL 379
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 109 bits (261), Expect = 1e-24
Identities = 45/74 (60%), Positives = 64/74 (86%)
Frame = -3
Query: 356 EEISTRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEA 177
+EI+TRPFQLVTGRTWKG+AFGG+KS +SVP+LVD+Y+ KL +DEF+TH + + +IN A
Sbjct: 306 QEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTA 365
Query: 176 FHLMHIGKSIRAVV 135
F ++H G+S+R+V+
Sbjct: 366 FDVLHKGESLRSVL 379
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 109 bits (261), Expect = 1e-24
Identities = 45/74 (60%), Positives = 64/74 (86%)
Frame = -3
Query: 356 EEISTRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEA 177
+EI+TRPFQLVTGRTWKG+AFGG+KS +SVP+LVD+Y+ KL +DEF+TH + + +IN A
Sbjct: 308 QEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTA 367
Query: 176 FHLMHIGKSIRAVV 135
F ++H G+S+R+V+
Sbjct: 368 FDVLHKGESLRSVL 381
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 101 bits (241), Expect = 3e-22
Identities = 42/72 (58%), Positives = 59/72 (81%)
Frame = -3
Query: 356 EEISTRPFQLVTGRTWKGSAFGGYKSRDSVPKLVDEYLKNKLPLDEFVTHNFQLKEINEA 177
+EI+TRPFQLVTGRTWKG+AFGG+KS +SVP+LVD+Y+ KL +DEF+TH + +IN A
Sbjct: 479 QEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRCNIDDINAA 538
Query: 176 FHLMHIGKSIRA 141
F ++ G+ +R+
Sbjct: 539 FDVLRKGEGLRS 550
>Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical
protein R53.2 protein.
Length = 218
Score = 27.9 bits (59), Expect = 3.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -3
Query: 272 SVPKLVDEYLKNKLPLDEFVTH 207
S+ KL+D+YL+ ++ +DE H
Sbjct: 59 SIGKLIDQYLRKEIDMDEHALH 80
>U39648-8|AAK39291.1| 270|Caenorhabditis elegans Beta carbonic
anhydrase protein1, isoform a protein.
Length = 270
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 95 KCSEIYVLQNFTSVQQHGLTFQYASSGKLH 184
K S+I VLQ ++ H +Y SG+LH
Sbjct: 183 KLSQINVLQQLINICSHEFLKEYLESGRLH 212
>U39648-7|AAM15604.1| 429|Caenorhabditis elegans Beta carbonic
anhydrase protein1, isoform b protein.
Length = 429
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 95 KCSEIYVLQNFTSVQQHGLTFQYASSGKLH 184
K S+I VLQ ++ H +Y SG+LH
Sbjct: 342 KLSQINVLQQLINICSHEFLKEYLESGRLH 371
>AL032655-7|CAH60798.1| 329|Caenorhabditis elegans Hypothetical
protein Y6B3B.12 protein.
Length = 329
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 316 RPVTSWKGRVLISSPAPATPIMTEIPQ 396
RP +W+ R +SSP PA PI + I +
Sbjct: 96 RPSVAWEVRKSMSSPNPALPISSIIAE 122
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 289 PPKADPFH-VRPVTSWKGRVLISSPAPATPIMTEIPQPL 402
PP D +RP+T + + SP P+ P++ P P+
Sbjct: 1684 PPPVDNVRLIRPITPAQPPIT-QSPVPSEPVVVRTPSPV 1721
>CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical
protein C42C1.7 protein.
Length = 710
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 166 CILESQSVLLYTCKIL*NIYLRAFKYVIPLHF 71
C+L +++ + +L + Y R FK ++PL+F
Sbjct: 53 CMLLTKTESMSLISVLTHFYTRRFKRILPLYF 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,105,364
Number of Sequences: 27780
Number of extensions: 146487
Number of successful extensions: 388
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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