Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K08
(409 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 27 0.082
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 27 0.11
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 27 0.11
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 27 0.11
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 2.3
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 22 3.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 4.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 4.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 4.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 4.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 4.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 4.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 4.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 4.1
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 5.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 5.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 20 9.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 20 9.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 20 9.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 20 9.4
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 20 9.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 9.4
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 27.1 bits (57), Expect = 0.082
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 274 IVYLNWLMNI*RISCPWMNLLLIISS*KRSMKLST*CILESQSVLLYTCKI 122
I+YL W + I P +L +ISS K M+LS + + ++++ KI
Sbjct: 808 ILYLTWYSSNGDIKVPSTKVLAMISSVKSFMELSLRSVKDRETIISAAEKI 858
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 26.6 bits (56), Expect = 0.11
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 245 LKNKLPLDEFVTHNFQLKEINEAFHLMHIGKSIR 144
L + +PLD Q ++ +E+F ++H G+++R
Sbjct: 173 LISSIPLDYIFLIFNQFQDFSESFQILHAGRALR 206
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 26.6 bits (56), Expect = 0.11
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 245 LKNKLPLDEFVTHNFQLKEINEAFHLMHIGKSIR 144
L + +PLD Q ++ +E+F ++H G+++R
Sbjct: 173 LISSIPLDYIFLIFNQFQDFSESFQILHAGRALR 206
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 26.6 bits (56), Expect = 0.11
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 245 LKNKLPLDEFVTHNFQLKEINEAFHLMHIGKSIR 144
L + +PLD Q ++ +E+F ++H G+++R
Sbjct: 173 LISSIPLDYIFLIFNQFQDFSESFQILHAGRALR 206
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 2.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 345 HSSLPACYWSYMEGISFW 292
H+ +P C M +SFW
Sbjct: 250 HTYIPTCLIVIMSWVSFW 267
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 21.8 bits (44), Expect = 3.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 218 IHPRATYSSNIHQPV*VHY 274
+HP AT+S ++++ V V Y
Sbjct: 139 VHPSATFSLDLNKVVSVFY 157
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNIFKCSEIYV 115
N N++ K+Q+YNI +I V
Sbjct: 99 NNYNTNYKKLQYYNIINIEQIPV 121
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNIFKCSEIYV 115
N N++ K+Q+YNI +I V
Sbjct: 99 NNYNTNYKKLQYYNIINIEQIPV 121
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNIFKCSEIYV 115
N N++ K+Q+YNI +I V
Sbjct: 99 NNYNTNYKKLQYYNIINIEQIPV 121
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNIFKCSEIYV 115
N N++ K+Q+YNI +I V
Sbjct: 99 NNYNTNYKKLQYYNIINIEQIPV 121
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNIFKCSEIYV 115
N N++ K+Q+YNI +I V
Sbjct: 99 NNYNTNYKKLQYYNIINIEQIPV 121
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNIFKCSEIYV 115
N N++ K+Q+YNI +I V
Sbjct: 99 NNYNTNYKKLQYYNIINIEQIPV 121
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNIFKCSEIYV 115
N N++ K+Q+YNI +I V
Sbjct: 103 NNYNTNYKKLQYYNIINIEQIPV 125
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNIFKCSEIYV 115
N N++ K+Q+YNI +I V
Sbjct: 99 NNYNTNYKKLQYYNIINIEQIPV 121
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.0 bits (42), Expect = 5.4
Identities = 5/17 (29%), Positives = 12/17 (70%)
Frame = +2
Query: 113 VLQNFTSVQQHGLTFQY 163
+ +N + +++ +TFQY
Sbjct: 415 IFKNMSQIEREAITFQY 431
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.0 bits (42), Expect = 5.4
Identities = 5/17 (29%), Positives = 12/17 (70%)
Frame = +2
Query: 113 VLQNFTSVQQHGLTFQY 163
+ +N + +++ +TFQY
Sbjct: 415 IFKNMSQIEREAITFQY 431
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNI 91
N N++ K+Q+YNI
Sbjct: 101 NYNNNNYKKLQYYNI 115
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNI 91
N N++ K+Q+YNI
Sbjct: 101 NYNNNNYKKLQYYNI 115
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNI 91
N N++ K+Q+YNI
Sbjct: 101 NYNNNNYKKLQYYNI 115
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 47 NMRNSSSLKMQWYNI 91
N N++ K+Q+YNI
Sbjct: 101 NYNNNNYKKLQYYNI 115
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 20.2 bits (40), Expect = 9.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 399 GLGYLCHYWSCW 364
G+GY SCW
Sbjct: 61 GIGYAAAVMSCW 72
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.2 bits (40), Expect = 9.4
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +1
Query: 133 CTTARIDFPICIKW 174
C+ R D P+ I W
Sbjct: 632 CSVTRGDLPLSISW 645
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,913
Number of Sequences: 438
Number of extensions: 1843
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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