Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K06
         (411 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   4.7  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   6.2  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   6.2  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   8.2  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 134 LYWR*NVP*SPPTP 93
           L W+ N P SPP P
Sbjct: 64  LAWQANSPPSPPAP 77


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 38  KTVIDDVDGLRPAPHPTD 91
           KTV+ +V G+  A  P D
Sbjct: 156 KTVVPEVGGVEEAKGPVD 173


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 280 VGCKRSASLSEYMP 239
           VGC  S  LSE MP
Sbjct: 96  VGCVESLLLSEEMP 109


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -1

Query: 126 ALKCSLITSHTRSVGWGAGLRPSTSSITVFTALCAIQY 13
           ALK +  T+   S    AGL+P+T       AL A  Y
Sbjct: 41  ALKDAGGTAADMSAWTSAGLQPTTGYYPYDPALAAYGY 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,764
Number of Sequences: 336
Number of extensions: 1828
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)