Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K05
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    23   2.1  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    23   2.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   3.7  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   3.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.5  

>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = +3

Query: 69  NRHFYRRFLRWTFLFGICGHRVQFVADLVPDA 164
           N+  +  +L+     G C      + D++PDA
Sbjct: 36  NKRLFDNYLQCLLKKGKCNEEAAILRDVIPDA 67


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = +3

Query: 69  NRHFYRRFLRWTFLFGICGHRVQFVADLVPDA 164
           N+  +  +L+     G C      + D++PDA
Sbjct: 36  NKRLFDNYLQCLLKKGKCNEEAAILRDVIPDA 67


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 550 GTVQTCASVLKNGNSLAISPG 612
           GT QT   V  NG+ L + PG
Sbjct: 102 GTFQTNVVVKHNGSCLYVPPG 122


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 550 GTVQTCASVLKNGNSLAISPG 612
           GT QT   V  NG+ L + PG
Sbjct: 102 GTFQTNVVVKHNGSCLYVPPG 122


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 80  LSPVSTLDFFIWNM 121
           + P+STL +F W++
Sbjct: 562 IRPISTLGWFFWSL 575


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 563 VCTVPGITHRFSR 525
           VC VPG+   FSR
Sbjct: 194 VCFVPGVVAMFSR 206


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 563 VCTVPGITHRFSR 525
           VC VPG+   FSR
Sbjct: 194 VCFVPGVVAMFSR 206


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 532  NLCVIPGTVQTCASVLKNGNSLAISPGGVYE 624
            N C  P  ++ C +VL N   L +    VYE
Sbjct: 1113 NRCFFPSKIRICWNVLLNCVYLFLCGFCVYE 1143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,662
Number of Sequences: 336
Number of extensions: 3192
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)