Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K05
         (636 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK056932-1|BAB71312.1|  257|Homo sapiens protein ( Homo sapiens ...   142   1e-33
BC071636-1|AAH71636.1|  135|Homo sapiens TMEM68 protein protein.       37   0.069
BC020835-1|AAH20835.1|  135|Homo sapiens TMEM68 protein protein.       37   0.069

>AK056932-1|BAB71312.1|  257|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32370 fis, clone PUAEN1000322. ).
          Length = 257

 Score =  142 bits (343), Expect = 1e-33
 Identities = 64/166 (38%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
 Frame = +1

Query: 133 YSLWLTWFLTPVIVTFLLPAVXXXXXXXXXXXFHLFRLYRLRVADGVQSDWRLAARLAIC 312
           ++ +L W  TP+I+  +LP              H+++   +       + W   AR  + 
Sbjct: 40  FANYLLWVFTPLIL-LILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWD-GARKTVA 97

Query: 313 ALWDAHGWLWHGYEIRGLENLP-DGPYLVIYYHGALPVDMYYLVARMQLFKQTQIHTVAD 489
            LWD H  +WHGYE+ G+E +P DGP L+I+YHGA+P+D YY +A++ + K      VAD
Sbjct: 98  TLWDGHAAVWHGYEVHGMEKIPEDGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVAD 157

Query: 490 RFMFRIPGWSMLLENLCVIPGTVQTCASVLKNGNSLAISPGGVYEA 627
            F+F+IPG+S+LL+  C + G  + C  +L++G+ LAISPGGV EA
Sbjct: 158 HFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREA 203


>BC071636-1|AAH71636.1|  135|Homo sapiens TMEM68 protein protein.
          Length = 135

 Score = 36.7 bits (81), Expect = 0.069
 Identities = 18/72 (25%), Positives = 31/72 (43%)
 Frame = +1

Query: 133 YSLWLTWFLTPVIVTFLLPAVXXXXXXXXXXXFHLFRLYRLRVADGVQSDWRLAARLAIC 312
           ++ +L W  TP+I+  +LP              H+++   +       + W   AR  + 
Sbjct: 40  FANYLLWVFTPLIL-LILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWD-GARKTVA 97

Query: 313 ALWDAHGWLWHG 348
            LWD H  +WHG
Sbjct: 98  TLWDGHAAVWHG 109


>BC020835-1|AAH20835.1|  135|Homo sapiens TMEM68 protein protein.
          Length = 135

 Score = 36.7 bits (81), Expect = 0.069
 Identities = 18/72 (25%), Positives = 31/72 (43%)
 Frame = +1

Query: 133 YSLWLTWFLTPVIVTFLLPAVXXXXXXXXXXXFHLFRLYRLRVADGVQSDWRLAARLAIC 312
           ++ +L W  TP+I+  +LP              H+++   +       + W   AR  + 
Sbjct: 40  FANYLLWVFTPLIL-LILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWD-GARKTVA 97

Query: 313 ALWDAHGWLWHG 348
            LWD H  +WHG
Sbjct: 98  TLWDGHAAVWHG 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,296,215
Number of Sequences: 237096
Number of extensions: 1862566
Number of successful extensions: 2938
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2937
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)