Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K05
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024761-13|AAP13758.1| 353|Caenorhabditis elegans Peroxiredoxi... 160 7e-40
AC024761-12|AAM97969.1| 387|Caenorhabditis elegans Peroxiredoxi... 160 7e-40
AC024761-14|AAM97970.1| 98|Caenorhabditis elegans Peroxiredoxi... 39 0.003
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 31 0.52
AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl pe... 31 0.52
AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical ... 30 1.2
Z70684-1|CAA94597.1| 580|Caenorhabditis elegans Hypothetical pr... 27 8.5
AC006634-3|AAF39795.3| 535|Caenorhabditis elegans Hypothetical ... 27 8.5
>AC024761-13|AAP13758.1| 353|Caenorhabditis elegans Peroxiredoxin
protein 6, isoform c protein.
Length = 353
Score = 160 bits (389), Expect = 7e-40
Identities = 70/175 (40%), Positives = 106/175 (60%), Gaps = 1/175 (0%)
Frame = +1
Query: 112 LEYVDTEYSLWLTWFLTPVIVTFLLPAVXXXXXXXXXXXFHLFRLYRLRVADGVQSDWRL 291
++Y+D +Y +L W L P + F+ P H++ +R ++ + + +
Sbjct: 34 VDYIDLDYLEYLLWLLLPFFILFIFPIFLVFFIYGCVIFVHIYG-HRHQIREAYHTSYWE 92
Query: 292 AARLAICALWDAHGWLWHGYEIRGLENLPD-GPYLVIYYHGALPVDMYYLVARMQLFKQT 468
AR+AI + WD G +WHGYE+RG+EN+PD G L IYYHG LP+D+YYL++++ + K
Sbjct: 93 GARVAIASFWDGVGNVWHGYELRGIENVPDEGSALFIYYHGCLPLDVYYLISKLVIHKNR 152
Query: 469 QIHTVADRFMFRIPGWSMLLENLCVIPGTVQTCASVLKNGNSLAISPGGVYEAQF 633
+H V D+F+F+IPGW L + + GTV+ C LK GN L I+PGGV EA F
Sbjct: 153 SLHCVGDKFIFKIPGWRPLCKLFSITSGTVEECTEELKEGNLLCIAPGGVREALF 207
>AC024761-12|AAM97969.1| 387|Caenorhabditis elegans Peroxiredoxin
protein 6, isoform a protein.
Length = 387
Score = 160 bits (389), Expect = 7e-40
Identities = 70/175 (40%), Positives = 106/175 (60%), Gaps = 1/175 (0%)
Frame = +1
Query: 112 LEYVDTEYSLWLTWFLTPVIVTFLLPAVXXXXXXXXXXXFHLFRLYRLRVADGVQSDWRL 291
++Y+D +Y +L W L P + F+ P H++ +R ++ + + +
Sbjct: 34 VDYIDLDYLEYLLWLLLPFFILFIFPIFLVFFIYGCVIFVHIYG-HRHQIREAYHTSYWE 92
Query: 292 AARLAICALWDAHGWLWHGYEIRGLENLPD-GPYLVIYYHGALPVDMYYLVARMQLFKQT 468
AR+AI + WD G +WHGYE+RG+EN+PD G L IYYHG LP+D+YYL++++ + K
Sbjct: 93 GARVAIASFWDGVGNVWHGYELRGIENVPDEGSALFIYYHGCLPLDVYYLISKLVIHKNR 152
Query: 469 QIHTVADRFMFRIPGWSMLLENLCVIPGTVQTCASVLKNGNSLAISPGGVYEAQF 633
+H V D+F+F+IPGW L + + GTV+ C LK GN L I+PGGV EA F
Sbjct: 153 SLHCVGDKFIFKIPGWRPLCKLFSITSGTVEECTEELKEGNLLCIAPGGVREALF 207
>AC024761-14|AAM97970.1| 98|Caenorhabditis elegans Peroxiredoxin
protein 6, isoform b protein.
Length = 98
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +1
Query: 142 WLTWFLTPVIVTFLLPAVXXXXXXXXXXXFHLFRLYRLRVADGVQSDWRLAARLAICALW 321
+L W L P + F+ P H++ +R ++ + + + AR+AI + W
Sbjct: 23 YLLWLLLPFFILFIFPIFLVFFIYGCVIFVHIYG-HRHQIREAYHTSYWEGARVAIASFW 81
Query: 322 DAHGWLWH 345
D G +WH
Sbjct: 82 DGVGNVWH 89
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 244 LYRLRVADGVQSDWRL--AARLAICALWDAHGWLWHGYEIRGL-ENLPDGPYLVIYYHGA 414
+YR +A G SDWRL A + ++ I GL E LPD P ++ HG
Sbjct: 796 IYRAAIAGGAVSDWRLYDTAYTERYMGYPLEEHVYGASSITGLVEKLPDEPNRLMLVHGL 855
Query: 415 LPVDMYY 435
+ ++++
Sbjct: 856 MDENVHF 862
>AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform a protein.
Length = 931
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 244 LYRLRVADGVQSDWRL--AARLAICALWDAHGWLWHGYEIRGL-ENLPDGPYLVIYYHGA 414
+YR +A G SDWRL A + ++ I GL E LPD P ++ HG
Sbjct: 800 IYRAAIAGGAVSDWRLYDTAYTERYMGYPLEEHVYGASSITGLVEKLPDEPNRLMLVHGL 859
Query: 415 LPVDMYY 435
+ ++++
Sbjct: 860 MDENVHF 866
>AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical
protein C18E3.3 protein.
Length = 893
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 180 PTSSSHYHPHIFKQYHLPLIQALQ 251
P S+ P IFKQYHLP ++ L+
Sbjct: 645 PLKISNQKPDIFKQYHLPTMKELE 668
>Z70684-1|CAA94597.1| 580|Caenorhabditis elegans Hypothetical
protein F28D1.1 protein.
Length = 580
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 87 RFLRWTFLFGICGHRVQFVADLVPDAGHRDLPTSSSH 197
RF+ W + GI GH F + LVP AG ++ T S+
Sbjct: 423 RFVPWEDVLGI-GHAGGFTSMLVPGAGDPNVDTLRSN 458
>AC006634-3|AAF39795.3| 535|Caenorhabditis elegans Hypothetical
protein F35F11.1 protein.
Length = 535
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +1
Query: 247 YRLRVADGVQS----DW-RLAARLAICALWDAHGWLWHG 348
Y +RV D + DW R+ A + W GW W+G
Sbjct: 426 YNIRVIDNAEKLANDDWDRVIAVFVMGVAWQFKGWKWNG 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,231,659
Number of Sequences: 27780
Number of extensions: 295662
Number of successful extensions: 761
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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