Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K03
         (366 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   2.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   2.3  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   3.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   3.9  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   5.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    20   6.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   6.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   9.1  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 58  DVTVEAPLPPPKPKVNRTLERM--KLKHNIITNPISAEKQKEVEYQ 189
           D+  E P   PK K+   +     KLKH I+   +  EK +E + Q
Sbjct: 144 DLAWEFPETKPK-KIRGKISSFFSKLKHKIVGESVIDEKAEEHKEQ 188


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 73  APLPPPKPKVNRTLERMK 126
           AP PPP P+V    E ++
Sbjct: 730 APPPPPPPRVESFAETVR 747


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 194 ISWPYRAQYT 223
           I+WPY A YT
Sbjct: 133 IAWPYAAVYT 142


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 52  TRDVTVEAPLPPPKPK 99
           T D  V + +PPP P+
Sbjct: 204 TEDCDVPSTIPPPPPE 219


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 234 YPIFVYCARY 205
           +P +VYC RY
Sbjct: 190 WPAWVYCTRY 199


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 267 CNRTSACLKSSYPI 226
           C+R  +CLK   PI
Sbjct: 16  CHRYISCLKGKMPI 29


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 267 CNRTSACLKSSYPI 226
           C+R  +CLK   PI
Sbjct: 172 CHRYISCLKGKMPI 185


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 29  GKKCAICVHA 58
           G+ CAICV+A
Sbjct: 726 GECCAICVNA 735


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 76  PLPPPKPKVNRTLERM 123
           P PPP+ +VN   E +
Sbjct: 229 PSPPPQLEVNERKENL 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,141
Number of Sequences: 336
Number of extensions: 1260
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)