Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K03
(366 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0311 - 24004380-24004440,24004685-24004756,24004875-240049... 32 0.12
01_07_0288 + 42534552-42534558,42535302-42537280,42537367-425375... 29 1.1
05_03_0619 + 16274255-16274396,16274775-16274848,16275111-162761... 28 2.0
02_02_0065 + 6490490-6491552,6491754-6493601,6493857-6494236 28 2.0
05_06_0046 - 25157093-25157431,25157810-25157928,25158024-251581... 28 2.6
11_02_0147 - 8791117-8792502 27 4.5
04_01_0439 + 5740472-5740836,5743693-5743939 27 4.5
09_04_0251 - 16089312-16089884 27 6.0
09_02_0106 + 4347024-4347536,4349619-4349700,4350499-4350747,435... 27 6.0
07_01_0055 + 424097-427129 27 6.0
04_04_0930 - 29480700-29480853,29481007-29483036 27 6.0
10_08_0457 + 18076911-18077272,18077356-18077475,18077554-180777... 26 7.9
08_02_0786 + 21198247-21198921 26 7.9
07_03_0930 + 22707088-22707313,22708001-22708443 26 7.9
04_03_0028 + 9698427-9698849,9698862-9699227 26 7.9
03_06_0358 + 33366265-33366447,33367371-33367468,33367910-333689... 26 7.9
01_01_0599 - 4448290-4448790 26 7.9
>05_05_0311 -
24004380-24004440,24004685-24004756,24004875-24004946,
24005155-24005298,24005535-24005606,24006057-24006286
Length = 216
Score = 32.3 bits (70), Expect = 0.12
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 64 TVEAPLPPPKPKVNRTLERMKLKHNIITNPISAE 165
T+ P+PP K+ ++L+ M++ HN++T PI E
Sbjct: 131 TISGPIPPSLGKL-KSLKFMRIDHNLLTGPIPNE 163
>01_07_0288 +
42534552-42534558,42535302-42537280,42537367-42537513,
42537982-42538526,42538906-42538981,42539357-42539437
Length = 944
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 7 CVQCVLLRKKMCNMCTRDVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQKE 177
C C L+ CN CT V A L P K R + LK N + + K+KE
Sbjct: 472 CHNCGLVH---CNACTSRKAVRAALAPNPAKPYRVCDSCFLKLNNAVDSSAISKKKE 525
>05_03_0619 +
16274255-16274396,16274775-16274848,16275111-16276139,
16276484-16276702,16277228-16277250,16277482-16277606,
16279480-16279670,16280202-16280360,16281359-16281598
Length = 733
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNI--ITNPISAEKQKEVEYQPDLLAVSS 213
APLPPP P +E LK + +T+ +S E KEVE +++ +++
Sbjct: 77 APLPPPDP-----IEYQFLKETVRELTSIMSDEWSKEVELSSEVIQINT 120
>02_02_0065 + 6490490-6491552,6491754-6493601,6493857-6494236
Length = 1096
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 82 PPPKPKVNRTLERMKLKHNIITNPISAE 165
P P N TLE++ ++HN+++ PI E
Sbjct: 537 PLPSDLKNCTLEKIDIQHNMLSGPIPRE 564
>05_06_0046 - 25157093-25157431,25157810-25157928,25158024-25158189,
25158289-25158415,25158490-25158590,25158719-25158905,
25159000-25159100,25159220-25160194,25160325-25160423,
25160500-25160972,25161307-25161420,25161830-25161900,
25162015-25162086,25162334-25162377
Length = 995
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 151 PISAEKQKEVEYQPDLLAVSSTIYENRIRA-LQAGTRAVTREQ 276
P+S ++QK ++ DLL V S +EN+ RA +A T+A R Q
Sbjct: 923 PVSRDQQKLLDDSSDLLIVYS--FENQDRAKSKAETKAADRRQ 963
>11_02_0147 - 8791117-8792502
Length = 461
Score = 27.1 bits (57), Expect = 4.5
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 28 RKKMCNMCTRDVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQKE 177
R + C + + P PPP P +NR +E K KH I + EK K+
Sbjct: 13 RGRFCPLQVGRQEPQGPYPPP-PDLNRGVEDGKAKHEEILQ-AAEEKGKQ 60
>04_01_0439 + 5740472-5740836,5743693-5743939
Length = 203
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 217 IYENRIRALQAGTRAVTREQGICHSYEDPATVPRGVSGVSAI 342
++ R+R GT A R + IC + D V + G A+
Sbjct: 103 VWRTRLRRRPRGTNAARRRKPICRTVSDAVHVLDNIVGYDAL 144
>09_04_0251 - 16089312-16089884
Length = 190
Score = 26.6 bits (56), Expect = 6.0
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 163 EKQKEVEYQPDLLAVSSTIYENRIRALQAGTRAVTREQGICHSYEDPATVPRG 321
E ++ VE P A ++ I +R LQ T V + C S E PA VPRG
Sbjct: 53 EDEEVVEVAP-AAAAAAAIPPFVMRRLQR-TVTVDSDDESCQSPEPPADVPRG 103
>09_02_0106 +
4347024-4347536,4349619-4349700,4350499-4350747,
4351594-4351646,4353064-4353159,4353289-4353423
Length = 375
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 166 KQKEVEYQPDLLAVSSTIYENRI 234
K K VEY P LL+V + YE ++
Sbjct: 158 KTKSVEYMPLLLSVEAESYERKV 180
>07_01_0055 + 424097-427129
Length = 1010
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 67 VEAPLPPPKPKVNRTLERMKLKHNIITNPISA 162
+E P+PP + R L+ + L HN +T ISA
Sbjct: 88 LEGPIPPSLAALAR-LQDLDLSHNALTGGISA 118
>04_04_0930 - 29480700-29480853,29481007-29483036
Length = 727
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 306 CGVFVAMTYALLSCNRTSACLKSSYPIF 223
C FVA + AL+ +RT +CL+ +YP F
Sbjct: 10 CFSFVA-SLALIILDRTCSCLQFTYPSF 36
>10_08_0457 +
18076911-18077272,18077356-18077475,18077554-18077782,
18077993-18078652,18079224-18079425,18079521-18079611,
18079780-18079837
Length = 573
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 103 NRTLERMKLKHNIITNPISAEKQKEVEYQPDLL 201
N + + +L HNI+ N + E+ E+E Q +L
Sbjct: 502 NSLITKQELFHNILANNLEIEETGEIEEQLHIL 534
>08_02_0786 + 21198247-21198921
Length = 224
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 31 KKMCNMCTRDVTVEAPLPPP 90
KK+C+ C RD AP PP
Sbjct: 34 KKLCSKCYRDQLKAAPSSPP 53
>07_03_0930 + 22707088-22707313,22708001-22708443
Length = 222
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 247 AGTRAVTREQGICHSYEDPATVPRGVSGVSA 339
A V+R+ G+CH +PA + G SA
Sbjct: 40 ARREGVSRQTGVCHLQRNPAGIELGADVCSA 70
>04_03_0028 + 9698427-9698849,9698862-9699227
Length = 262
Score = 26.2 bits (55), Expect = 7.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNI--ITNPISAEKQKEVEYQPDLLAVSS 213
APLPPP P +E LK + +T+ +S E KE E +++ +++
Sbjct: 11 APLPPPDP-----IEYQYLKETVQELTSIMSDEWLKEAELSSEVIRINT 54
>03_06_0358 +
33366265-33366447,33367371-33367468,33367910-33368945,
33369042-33369554,33370456-33370644,33370715-33370848,
33371196-33371358
Length = 771
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 154 ISAEKQKEVEYQPDLLAVSSTIYENRIR 237
++ EKQK+ D+LAV I +NR++
Sbjct: 187 VADEKQKQTLTTADILAVKRAISDNRLK 214
>01_01_0599 - 4448290-4448790
Length = 166
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 37 MCNMCTRDVTVEAPLPPPKPKVNRTLE 117
+C VTVE LPPP+PK +T+E
Sbjct: 137 VCQDGVLTVTVEK-LPPPEPKKPKTIE 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,691,593
Number of Sequences: 37544
Number of extensions: 142907
Number of successful extensions: 655
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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