BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_K03
(366 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119181-1|AAM51041.1| 503|Drosophila melanogaster SD02285p pro... 32 0.26
AY069521-1|AAL39666.2| 958|Drosophila melanogaster LD23810p pro... 28 3.3
AE014297-2053|AAF55204.2| 2183|Drosophila melanogaster CG5205-PA... 28 3.3
AE014296-295|AAZ66050.1| 495|Drosophila melanogaster CG18170-PB... 28 3.3
AE014296-294|AAZ66049.1| 495|Drosophila melanogaster CG18170-PA... 28 3.3
AE013599-3105|AAF46654.1| 957|Drosophila melanogaster CG9346-PA... 28 3.3
DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 prot... 28 4.3
BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p pro... 28 4.3
AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-P... 28 4.3
Y14213-1|CAA74606.1| 307|Drosophila melanogaster serine /threon... 27 5.7
BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p pro... 27 5.7
BT023847-1|AAZ86768.1| 921|Drosophila melanogaster IP13961p pro... 27 5.7
BT011155-1|AAR82823.1| 745|Drosophila melanogaster AT29074p pro... 27 5.7
AY113503-1|AAM29508.1| 307|Drosophila melanogaster RE58406p pro... 27 5.7
AE014298-3021|AAN09547.1| 307|Drosophila melanogaster CG32505-P... 27 5.7
AE014298-3020|AAF50905.1| 307|Drosophila melanogaster CG32505-P... 27 5.7
AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,... 27 5.7
AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,... 27 5.7
AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD... 27 5.7
AE014134-1425|AAF52617.1| 921|Drosophila melanogaster CG8419-PA... 27 5.7
BT029971-1|ABM92845.1| 251|Drosophila melanogaster IP18102p pro... 27 10.0
BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p pro... 27 10.0
AY089375-1|AAL90113.1| 1196|Drosophila melanogaster AT19506p pro... 27 10.0
AY070677-1|AAL48148.1| 131|Drosophila melanogaster RH16027p pro... 27 10.0
AY069824-1|AAL39969.1| 907|Drosophila melanogaster SD07276p pro... 27 10.0
AY060370-1|AAL25409.1| 436|Drosophila melanogaster LD23009p pro... 27 10.0
AE014298-3083|AAF50857.2| 436|Drosophila melanogaster CG32512-P... 27 10.0
AE014297-4778|AAN14281.1| 1121|Drosophila melanogaster CG1815-PB... 27 10.0
AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC... 27 10.0
AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA... 27 10.0
AE014297-2383|AAF55448.2| 1534|Drosophila melanogaster CG14322-P... 27 10.0
AE013599-1687|AAM68607.1| 131|Drosophila melanogaster CG17041-P... 27 10.0
AE013599-1686|AAM68606.1| 131|Drosophila melanogaster CG17041-P... 27 10.0
AE013599-1685|AAF58391.2| 131|Drosophila melanogaster CG17041-P... 27 10.0
>AY119181-1|AAM51041.1| 503|Drosophila melanogaster SD02285p
protein.
Length = 503
Score = 31.9 bits (69), Expect = 0.26
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQPDLLAVSSTIYENRIRALQAG 252
AP PPPKPK+ T + T + + KE + Q LLA+ + + Q
Sbjct: 163 APPPPPKPKIVNTFTEIP-----GTTGVGSSYAKEQQQQQQLLALQQQQQQQLLTLQQQR 217
Query: 253 TRAVTREQGICHSYE-DPATVPRGVSGVSAISLVEQARV 366
R + ++Q H E P T + SA+ +E + V
Sbjct: 218 ERELQQQQQQQHQRELHPPTT--HILPASAVYSIESSEV 254
>AY069521-1|AAL39666.2| 958|Drosophila melanogaster LD23810p protein.
Length = 958
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +1
Query: 148 NPISAEKQKEVEYQPDLLAVSSTIYENRIRALQAGTRAVTREQGICHSYEDPAT 309
+P S + K +Y P+ S + NR R+ + + T YE PA+
Sbjct: 869 SPFSGGESKRRDYSPETSRSSKSSKRNRSRSPSSSPKRYTERSSRSSRYETPAS 922
>AE014297-2053|AAF55204.2| 2183|Drosophila melanogaster CG5205-PA
protein.
Length = 2183
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +1
Query: 58 DVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQPDL 198
D+++ L P NRT+ + +KH P+++ + + P+L
Sbjct: 180 DISLLTDLAPDALLKNRTVNKFSMKHTTKAAPVASTSSEAAKLSPEL 226
>AE014296-295|AAZ66050.1| 495|Drosophila melanogaster CG18170-PB,
isoform B protein.
Length = 495
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 164 RNRKK*NINPISWPYRAQYTKIGYELFKQALVRLQESKAYVIATKTPQ 307
+ R K N PI+ Y Y + G L K+ L +++ +K + +K+P+
Sbjct: 285 KKRSKTNSKPINVMYFKNYYEKGLRLRKERLNKIKSNKKIKMPSKSPK 332
>AE014296-294|AAZ66049.1| 495|Drosophila melanogaster CG18170-PA,
isoform A protein.
Length = 495
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 164 RNRKK*NINPISWPYRAQYTKIGYELFKQALVRLQESKAYVIATKTPQ 307
+ R K N PI+ Y Y + G L K+ L +++ +K + +K+P+
Sbjct: 285 KKRSKTNSKPINVMYFKNYYEKGLRLRKERLNKIKSNKKIKMPSKSPK 332
>AE013599-3105|AAF46654.1| 957|Drosophila melanogaster CG9346-PA
protein.
Length = 957
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +1
Query: 148 NPISAEKQKEVEYQPDLLAVSSTIYENRIRALQAGTRAVTREQGICHSYEDPAT 309
+P S + K +Y P+ S + NR R+ + + T YE PA+
Sbjct: 868 SPFSGGESKRRDYSPETSRSSKSSKRNRSRSPSSSPKRYTERSSRSSRYETPAS 921
>DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 protein.
Length = 1309
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 VEAPL--PPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQPDLLAVSSTIYENRIRA 240
+E P+ PPP+P + R K +++ P + ++ E +P L+ S+ +R +
Sbjct: 1134 LELPMETPPPQPSRSSGKSRSKSSKSMVAPPPAKSEETEPPLEPTNLSTSAPKVASRSPS 1193
Query: 241 LQAGT 255
AG+
Sbjct: 1194 TGAGS 1198
>BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p protein.
Length = 1322
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 VEAPL--PPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQPDLLAVSSTIYENRIRA 240
+E P+ PPP+P + R K +++ P + ++ E +P L+ S+ +R +
Sbjct: 1141 LELPMETPPPQPSRSSGKSRSKSSKSMVAPPPAKSEETEPPLEPTNLSTSAPKVASRSPS 1200
Query: 241 LQAGT 255
AG+
Sbjct: 1201 TGAGS 1205
>AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-PA
protein.
Length = 1322
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 VEAPL--PPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQPDLLAVSSTIYENRIRA 240
+E P+ PPP+P + R K +++ P + ++ E +P L+ S+ +R +
Sbjct: 1141 LELPMETPPPQPSRSSGKSRSKSSKSMVAPPPAKSEETEPPLEPTNLSTSAPKVASRSPS 1200
Query: 241 LQAGT 255
AG+
Sbjct: 1201 TGAGS 1205
>Y14213-1|CAA74606.1| 307|Drosophila melanogaster serine /threonine
specific proteinphosphatase 4 protein.
Length = 307
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 EVEYQPDLLAVSSTIYENRIRALQAGTRAVTREQGICHSYEDPATVPRGVSG 330
+++ Q + L I EN ++AL A R + E+G + P TV + G
Sbjct: 6 DLDRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHG 57
>BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p protein.
Length = 1354
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIITNPISAEK 168
APLPPP+ N R + NI T+P+ +
Sbjct: 1103 APLPPPRTISNTLGRRRRDSSNITTSPLQVAR 1134
>BT023847-1|AAZ86768.1| 921|Drosophila melanogaster IP13961p
protein.
Length = 921
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 58 DVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQKE 177
DV + P PPP P V + KLK + + IS K +
Sbjct: 33 DVEIVVPSPPPTPAVPPSASLGKLKIKLSSAKISLRKNAQ 72
>BT011155-1|AAR82823.1| 745|Drosophila melanogaster AT29074p
protein.
Length = 745
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIITNPISAEK 168
APLPPP+ N R + NI T+P+ +
Sbjct: 494 APLPPPRTISNTLGRRRRDSSNITTSPLQVAR 525
>AY113503-1|AAM29508.1| 307|Drosophila melanogaster RE58406p
protein.
Length = 307
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 EVEYQPDLLAVSSTIYENRIRALQAGTRAVTREQGICHSYEDPATVPRGVSG 330
+++ Q + L I EN ++AL A R + E+G + P TV + G
Sbjct: 6 DLDRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHG 57
>AE014298-3021|AAN09547.1| 307|Drosophila melanogaster CG32505-PE,
isoform E protein.
Length = 307
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 EVEYQPDLLAVSSTIYENRIRALQAGTRAVTREQGICHSYEDPATVPRGVSG 330
+++ Q + L I EN ++AL A R + E+G + P TV + G
Sbjct: 6 DLDRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHG 57
>AE014298-3020|AAF50905.1| 307|Drosophila melanogaster CG32505-PA,
isoform A protein.
Length = 307
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 EVEYQPDLLAVSSTIYENRIRALQAGTRAVTREQGICHSYEDPATVPRGVSG 330
+++ Q + L I EN ++AL A R + E+G + P TV + G
Sbjct: 6 DLDRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHG 57
>AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,
isoform C protein.
Length = 1201
Score = 27.5 bits (58), Expect = 5.7
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQPDLLAVSSTIYENRIRAL--- 243
AP PPPKPK+ T + T + + KE + Q LLA+ + + + L
Sbjct: 862 APPPPPKPKIVNTFTEIP-----GTTGVGSSYAKEQQQQQQLLALQQQQQQQQQQQLLTL 916
Query: 244 -QAGTRAVTREQGICHSYE-DPATVPRGVSGVSAISLVEQARV 366
Q R + ++Q H E P T + SA+ +E + V
Sbjct: 917 QQQRERELQQQQQQQHQRELHPPTT--HILPASAVYSIESSEV 957
>AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,
isoform D protein.
Length = 1404
Score = 27.5 bits (58), Expect = 5.7
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQPDLLAVSSTIYENRIRAL--- 243
AP PPPKPK+ T + T + + KE + Q LLA+ + + + L
Sbjct: 862 APPPPPKPKIVNTFTEIP-----GTTGVGSSYAKEQQQQQQLLALQQQQQQQQQQQLLTL 916
Query: 244 -QAGTRAVTREQGICHSYE-DPATVPRGVSGVSAISLVEQARV 366
Q R + ++Q H E P T + SA+ +E + V
Sbjct: 917 QQQRERELQQQQQQQHQRELHPPTT--HILPASAVYSIESSEV 957
>AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD
protein.
Length = 1354
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIITNPISAEK 168
APLPPP+ N R + NI T+P+ +
Sbjct: 1103 APLPPPRTISNTLGRRRRDSSNITTSPLQVAR 1134
>AE014134-1425|AAF52617.1| 921|Drosophila melanogaster CG8419-PA
protein.
Length = 921
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 58 DVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQKE 177
DV + P PPP P V + KLK + + IS K +
Sbjct: 33 DVEIVVPSPPPTPAVPPSASLGKLKIKLSSAKISLRKNAQ 72
>BT029971-1|ABM92845.1| 251|Drosophila melanogaster IP18102p
protein.
Length = 251
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 49 CTRDVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQ 189
C + + P PPKPK +T ++ + N + +S ++ + E Q
Sbjct: 162 CWHPIMWQDPPEPPKPKKKKTKTQLDDEGNEVVIELSEDESSDEEEQ 208
>BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p protein.
Length = 1664
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIIT 147
AP P PKP N E +++K I++
Sbjct: 963 APAPQPKPVDNAPFEEVRIKEEILS 987
>AY089375-1|AAL90113.1| 1196|Drosophila melanogaster AT19506p
protein.
Length = 1196
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 28 RKKMCNMCTRDVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQK 174
+KK N T+ V + PP+ V TLE + ITNP +A++ K
Sbjct: 192 KKKTFNRDTK-VNGNKAMNPPQETVIETLEHSDSINRSITNPKTADELK 239
>AY070677-1|AAL48148.1| 131|Drosophila melanogaster RH16027p
protein.
Length = 131
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 49 CTRDVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQ 189
C + + P PPKPK +T ++ + N + +S ++ + E Q
Sbjct: 42 CWHPIMWQDPPEPPKPKKKKTKTQLDDEGNEVVIELSEDESSDEEEQ 88
>AY069824-1|AAL39969.1| 907|Drosophila melanogaster SD07276p
protein.
Length = 907
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIIT 147
AP P PKP N E +++K I++
Sbjct: 749 APAPQPKPVDNAPFEEVRIKEEILS 773
>AY060370-1|AAL25409.1| 436|Drosophila melanogaster LD23009p
protein.
Length = 436
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 215 QYTKIGYELFKQALVRLQESKAYVIATKTPQPFH 316
Q T+ E + +LQ S+ Y I T+T QP H
Sbjct: 184 QMTRQVSERITCLVAKLQASRLYTILTRTTQPAH 217
>AE014298-3083|AAF50857.2| 436|Drosophila melanogaster CG32512-PA
protein.
Length = 436
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 215 QYTKIGYELFKQALVRLQESKAYVIATKTPQPFH 316
Q T+ E + +LQ S+ Y I T+T QP H
Sbjct: 184 QMTRQVSERITCLVAKLQASRLYTILTRTTQPAH 217
>AE014297-4778|AAN14281.1| 1121|Drosophila melanogaster CG1815-PB,
isoform B protein.
Length = 1121
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIIT 147
AP P PKP N E +++K I++
Sbjct: 963 APAPQPKPVDNAPFEEVRIKEEILS 987
>AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC,
isoform C protein.
Length = 1664
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIIT 147
AP P PKP N E +++K I++
Sbjct: 963 APAPQPKPVDNAPFEEVRIKEEILS 987
>AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA,
isoform A protein.
Length = 1674
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 73 APLPPPKPKVNRTLERMKLKHNIIT 147
AP P PKP N E +++K I++
Sbjct: 973 APAPQPKPVDNAPFEEVRIKEEILS 997
>AE014297-2383|AAF55448.2| 1534|Drosophila melanogaster CG14322-PA
protein.
Length = 1534
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 28 RKKMCNMCTRDVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQK 174
+KK N T+ V + PP+ V TLE + ITNP +A++ K
Sbjct: 530 KKKTFNRDTK-VNGNKAMNPPQETVIETLEHSDSINRSITNPKTADELK 577
>AE013599-1687|AAM68607.1| 131|Drosophila melanogaster CG17041-PC,
isoform C protein.
Length = 131
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 49 CTRDVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQ 189
C + + P PPKPK +T ++ + N + +S ++ + E Q
Sbjct: 42 CWHPIMWQDPPEPPKPKKKKTKTQLDDEGNEVVIELSEDESSDEEEQ 88
>AE013599-1686|AAM68606.1| 131|Drosophila melanogaster CG17041-PB,
isoform B protein.
Length = 131
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 49 CTRDVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQ 189
C + + P PPKPK +T ++ + N + +S ++ + E Q
Sbjct: 42 CWHPIMWQDPPEPPKPKKKKTKTQLDDEGNEVVIELSEDESSDEEEQ 88
>AE013599-1685|AAF58391.2| 131|Drosophila melanogaster CG17041-PA,
isoform A protein.
Length = 131
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 49 CTRDVTVEAPLPPPKPKVNRTLERMKLKHNIITNPISAEKQKEVEYQ 189
C + + P PPKPK +T ++ + N + +S ++ + E Q
Sbjct: 42 CWHPIMWQDPPEPPKPKKKKTKTQLDDEGNEVVIELSEDESSDEEEQ 88
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,455,952
Number of Sequences: 53049
Number of extensions: 246430
Number of successful extensions: 1212
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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