Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_K02
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.71 
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   2.2  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   6.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   8.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   8.7  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    20   8.7  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 0.71
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +1

Query: 268 CSTGSTPGKDCHVTCNQLLTDDISVAATCAKKI 366
           C  G T GK CH   N    +      TC  KI
Sbjct: 56  CQPGFT-GKYCHENINDCKVNPCENGGTCVDKI 87


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 107 NPHLVKRFASQCKASAKRASNITYFDIMFPS 15
           NP  ++R  +QC+ + +  S+ T   I   S
Sbjct: 84  NPRALRRLRTQCERAKRTLSSATQASIEIDS 114


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 107 NPHLVKRFASQCKASAKRASNITYFDIMFPS 15
           NP  ++R  +QC+ + +  S+ T   I   S
Sbjct: 84  NPRALRRLRTQCERAKRTLSSATQASIEIDS 114


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 232  DYGLFQINDKYWCSTGSTPGK 294
            DY     +  YW   G+ PGK
Sbjct: 2538 DYFNANFSLNYWIEKGADPGK 2558


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 29  CRSTLYCSPFWHSLCIAMR 85
           CR   Y + + HSL I +R
Sbjct: 289 CRDCSYATKYCHSLKIHLR 307


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 29  CRSTLYCSPFWHSLCIAMR 85
           CR   Y + + HSL I +R
Sbjct: 47  CRDCSYATKYCHSLKIHLR 65


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 165 PCRERKRTVYRQNW 206
           PCR R++  +R+N+
Sbjct: 589 PCRPREQLTWRRNF 602


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 165 PCRERKRTVYRQNW 206
           PCR R++  +R+N+
Sbjct: 481 PCRPREQLTWRRNF 494


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 142 SLMSNWVCLVENESGRFTDKIGKVNKN 222
           ++++N VC V      F+ K   +N+N
Sbjct: 188 AMLTNAVCFVPGVVAMFSRKPCSINEN 214


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 142 SLMSNWVCLVENESGRFTDKIGKVNKN 222
           ++++N VC V      F+ K   +N+N
Sbjct: 188 AMLTNAVCFVPGVVAMFSRKPCSINEN 214


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 293 FPGVDPVLHQYL 258
           FPG+DPV+ + L
Sbjct: 124 FPGLDPVVKRRL 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,701
Number of Sequences: 336
Number of extensions: 1954
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)