BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_J24
(337 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC005058-2|AAD08846.1| 247|Homo sapiens WUGSC:H_RG054D04.1 prot... 39 0.003
X57958-1|CAA41026.1| 253|Homo sapiens ribosomal protein L7 prot... 39 0.004
BC106056-1|AAI06057.1| 318|Homo sapiens RPL7 protein protein. 39 0.004
X57959-1|CAA41027.1| 248|Homo sapiens ribosomal protein L7 prot... 38 0.008
X52967-1|CAA37139.1| 248|Homo sapiens ribosomal protein L7 prot... 38 0.008
L16558-1|AAA03081.1| 248|Homo sapiens ribosomal protein L7 prot... 38 0.008
BC087837-1|AAH87837.1| 248|Homo sapiens ribosomal protein L7 pr... 38 0.008
BC071895-1|AAH71895.1| 248|Homo sapiens ribosomal protein L7 pr... 38 0.008
BC071894-1|AAH71894.1| 248|Homo sapiens ribosomal protein L7 pr... 38 0.008
BC071671-1|AAH71671.1| 248|Homo sapiens ribosomal protein L7 pr... 38 0.008
BC009599-1|AAH09599.1| 248|Homo sapiens ribosomal protein L7 pr... 38 0.008
BC008850-1|AAH08850.1| 248|Homo sapiens ribosomal protein L7 pr... 38 0.008
BC006095-1|AAH06095.1| 248|Homo sapiens ribosomal protein L7 pr... 38 0.008
CR456773-1|CAG33054.1| 248|Homo sapiens RPL7 protein. 36 0.023
BC073890-1|AAH73890.1| 246|Homo sapiens ribosomal protein L7-li... 29 2.7
BC058020-1|AAH58020.1| 246|Homo sapiens RPL7L1 protein protein. 29 2.7
AL590729-2|CAI14327.1| 189|Homo sapiens mitochondrial trans-2-e... 29 2.7
AL035587-3|CAI21486.1| 246|Homo sapiens ribosomal protein L7-li... 29 2.7
BC112226-1|AAI12227.2| 637|Homo sapiens R3H domain containing 2... 28 6.2
BC104995-1|AAI04996.2| 637|Homo sapiens R3H domain containing 2... 28 6.2
BC041857-1|AAH41857.1| 681|Homo sapiens R3HDM2 protein protein. 28 6.2
AB023219-1|BAA76846.2| 962|Homo sapiens KIAA1002 protein protein. 28 6.2
AF217973-1|AAG17216.1| 130|Homo sapiens unknown protein. 28 8.2
>AC005058-2|AAD08846.1| 247|Homo sapiens WUGSC:H_RG054D04.1
protein.
Length = 247
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +1
Query: 85 GKEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRI 264
G E+ + +PAVPE++ + ++ +RK ++++A+ Y +EYR
Sbjct: 3 GVEEKKKVPAVPETLKKKRRNFSELKMKRLRKKFAQKMLRKARRKLIYEKAKHYHREYRQ 62
Query: 265 KERDEIRLAR 294
R EIR+AR
Sbjct: 63 MYRTEIRMAR 72
>X57958-1|CAA41026.1| 253|Homo sapiens ribosomal protein L7
protein.
Length = 253
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +1
Query: 82 KGKEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYR 261
+ +E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 8 RAEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYR 67
Query: 262 IKERDEIRLAR 294
R EIR+AR
Sbjct: 68 QMYRTEIRMAR 78
>BC106056-1|AAI06057.1| 318|Homo sapiens RPL7 protein protein.
Length = 318
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Frame = +1
Query: 46 QKRSAAAEKKPV---KGKEDSQT-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKK 213
+KR+AA + + V +G E+ + +PAVPE++ + ++ +
Sbjct: 57 KKRTAARDLELVGTMEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKAR 116
Query: 214 RKELFKRAEQYVKEYRIKERDEIRLAR 294
RK ++++A+ Y KEYR R EIR+AR
Sbjct: 117 RKLIYEKAKHYHKEYRQMYRTEIRMAR 143
>X57959-1|CAA41027.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>X52967-1|CAA37139.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>L16558-1|AAA03081.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>BC087837-1|AAH87837.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>BC071895-1|AAH71895.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>BC071894-1|AAH71894.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>BC071671-1|AAH71671.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>BC009599-1|AAH09599.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>BC008850-1|AAH08850.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>BC006095-1|AAH06095.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +RK ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>CR456773-1|CAG33054.1| 248|Homo sapiens RPL7 protein.
Length = 248
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+E + +PAVPE++ + ++ +R+ ++++A+ Y KEYR
Sbjct: 5 EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRELIYEKAKHYHKEYRQM 64
Query: 268 ERDEIRLAR 294
R EIR+AR
Sbjct: 65 YRTEIRMAR 73
>BC073890-1|AAH73890.1| 246|Homo sapiens ribosomal protein L7-like
1 protein.
Length = 246
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+++ + +P VPE++ + L + K + FKR E ++ + +
Sbjct: 3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62
Query: 268 ERDEIRLAR 294
+RD++RL R
Sbjct: 63 KRDKVRLRR 71
>BC058020-1|AAH58020.1| 246|Homo sapiens RPL7L1 protein protein.
Length = 246
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+++ + +P VPE++ + L + K + FKR E ++ + +
Sbjct: 3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62
Query: 268 ERDEIRLAR 294
+RD++RL R
Sbjct: 63 KRDKVRLRR 71
>AL590729-2|CAI14327.1| 189|Homo sapiens mitochondrial
trans-2-enoyl-CoA reductase protein.
Length = 189
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 50 KEVLRPR-KNL*RVKRTVRRCQLFRNQS*STVKGGRHSELAVFRSHSRGVPLP 205
+E+ RP KN ++++ R + NQ+ KG R SELA +S+ + LP
Sbjct: 79 EELRRPEMKNFFKIRKLRLRKEEMLNQNHIVYKGSRESELASVSPNSKPLNLP 131
>AL035587-3|CAI21486.1| 246|Homo sapiens ribosomal protein L7-like
1 protein.
Length = 246
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +1
Query: 88 KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
+++ + +P VPE++ + L + K + FKR E ++ + +
Sbjct: 3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62
Query: 268 ERDEIRLAR 294
+RD++RL R
Sbjct: 63 KRDKVRLRR 71
>BC112226-1|AAI12227.2| 637|Homo sapiens R3H domain containing 2
protein.
Length = 637
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 137 TVKGGRHSELAVFRSHSRGVPLPLRRGKNSLREPNNMSK 253
T + GRHS+LA + P PL SLR N++S+
Sbjct: 578 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 616
>BC104995-1|AAI04996.2| 637|Homo sapiens R3H domain containing 2
protein.
Length = 637
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 137 TVKGGRHSELAVFRSHSRGVPLPLRRGKNSLREPNNMSK 253
T + GRHS+LA + P PL SLR N++S+
Sbjct: 578 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 616
>BC041857-1|AAH41857.1| 681|Homo sapiens R3HDM2 protein protein.
Length = 681
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 137 TVKGGRHSELAVFRSHSRGVPLPLRRGKNSLREPNNMSK 253
T + GRHS+LA + P PL SLR N++S+
Sbjct: 622 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 660
>AB023219-1|BAA76846.2| 962|Homo sapiens KIAA1002 protein protein.
Length = 962
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 137 TVKGGRHSELAVFRSHSRGVPLPLRRGKNSLREPNNMSK 253
T + GRHS+LA + P PL SLR N++S+
Sbjct: 903 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 941
>AF217973-1|AAG17216.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 300 AMSCQSDFITLLDAVFFDILFGSLKEFFPLLNGSGT-PLECDLKTASSECLP 148
++ + DF+ L +FF F ++ P L SGT C+L S P
Sbjct: 11 SVDSRGDFLVFLCPIFFSFSFSEVESLSPRLECSGTISAHCNLCLLGSSYSP 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,861,535
Number of Sequences: 237096
Number of extensions: 970590
Number of successful extensions: 2662
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2661
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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