SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_J24
         (337 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC005058-2|AAD08846.1|  247|Homo sapiens WUGSC:H_RG054D04.1 prot...    39   0.003
X57958-1|CAA41026.1|  253|Homo sapiens ribosomal protein L7 prot...    39   0.004
BC106056-1|AAI06057.1|  318|Homo sapiens RPL7 protein protein.         39   0.004
X57959-1|CAA41027.1|  248|Homo sapiens ribosomal protein L7 prot...    38   0.008
X52967-1|CAA37139.1|  248|Homo sapiens ribosomal protein L7 prot...    38   0.008
L16558-1|AAA03081.1|  248|Homo sapiens ribosomal protein L7 prot...    38   0.008
BC087837-1|AAH87837.1|  248|Homo sapiens ribosomal protein L7 pr...    38   0.008
BC071895-1|AAH71895.1|  248|Homo sapiens ribosomal protein L7 pr...    38   0.008
BC071894-1|AAH71894.1|  248|Homo sapiens ribosomal protein L7 pr...    38   0.008
BC071671-1|AAH71671.1|  248|Homo sapiens ribosomal protein L7 pr...    38   0.008
BC009599-1|AAH09599.1|  248|Homo sapiens ribosomal protein L7 pr...    38   0.008
BC008850-1|AAH08850.1|  248|Homo sapiens ribosomal protein L7 pr...    38   0.008
BC006095-1|AAH06095.1|  248|Homo sapiens ribosomal protein L7 pr...    38   0.008
CR456773-1|CAG33054.1|  248|Homo sapiens RPL7 protein.                 36   0.023
BC073890-1|AAH73890.1|  246|Homo sapiens ribosomal protein L7-li...    29   2.7  
BC058020-1|AAH58020.1|  246|Homo sapiens RPL7L1 protein protein.       29   2.7  
AL590729-2|CAI14327.1|  189|Homo sapiens mitochondrial trans-2-e...    29   2.7  
AL035587-3|CAI21486.1|  246|Homo sapiens ribosomal protein L7-li...    29   2.7  
BC112226-1|AAI12227.2|  637|Homo sapiens R3H domain containing 2...    28   6.2  
BC104995-1|AAI04996.2|  637|Homo sapiens R3H domain containing 2...    28   6.2  
BC041857-1|AAH41857.1|  681|Homo sapiens R3HDM2 protein protein.       28   6.2  
AB023219-1|BAA76846.2|  962|Homo sapiens KIAA1002 protein protein.     28   6.2  
AF217973-1|AAG17216.1|  130|Homo sapiens unknown protein.              28   8.2  

>AC005058-2|AAD08846.1|  247|Homo sapiens WUGSC:H_RG054D04.1
           protein.
          Length = 247

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = +1

Query: 85  GKEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRI 264
           G E+ + +PAVPE++               +    ++     +RK ++++A+ Y +EYR 
Sbjct: 3   GVEEKKKVPAVPETLKKKRRNFSELKMKRLRKKFAQKMLRKARRKLIYEKAKHYHREYRQ 62

Query: 265 KERDEIRLAR 294
             R EIR+AR
Sbjct: 63  MYRTEIRMAR 72


>X57958-1|CAA41026.1|  253|Homo sapiens ribosomal protein L7
           protein.
          Length = 253

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 20/71 (28%), Positives = 36/71 (50%)
 Frame = +1

Query: 82  KGKEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYR 261
           + +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR
Sbjct: 8   RAEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYR 67

Query: 262 IKERDEIRLAR 294
              R EIR+AR
Sbjct: 68  QMYRTEIRMAR 78


>BC106056-1|AAI06057.1|  318|Homo sapiens RPL7 protein protein.
          Length = 318

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
 Frame = +1

Query: 46  QKRSAAAEKKPV---KGKEDSQT-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKK 213
           +KR+AA + + V   +G E+ +  +PAVPE++               +    ++     +
Sbjct: 57  KKRTAARDLELVGTMEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKAR 116

Query: 214 RKELFKRAEQYVKEYRIKERDEIRLAR 294
           RK ++++A+ Y KEYR   R EIR+AR
Sbjct: 117 RKLIYEKAKHYHKEYRQMYRTEIRMAR 143


>X57959-1|CAA41027.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>X52967-1|CAA37139.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>L16558-1|AAA03081.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>BC087837-1|AAH87837.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>BC071895-1|AAH71895.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>BC071894-1|AAH71894.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>BC071671-1|AAH71671.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>BC009599-1|AAH09599.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>BC008850-1|AAH08850.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>BC006095-1|AAH06095.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +RK ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>CR456773-1|CAG33054.1|  248|Homo sapiens RPL7 protein.
          Length = 248

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +E  + +PAVPE++               +    ++     +R+ ++++A+ Y KEYR  
Sbjct: 5   EEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRELIYEKAKHYHKEYRQM 64

Query: 268 ERDEIRLAR 294
            R EIR+AR
Sbjct: 65  YRTEIRMAR 73


>BC073890-1|AAH73890.1|  246|Homo sapiens ribosomal protein L7-like
           1 protein.
          Length = 246

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/69 (21%), Positives = 32/69 (46%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +++ + +P VPE++               +  L  +    K +   FKR E ++ +   +
Sbjct: 3   EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62

Query: 268 ERDEIRLAR 294
           +RD++RL R
Sbjct: 63  KRDKVRLRR 71


>BC058020-1|AAH58020.1|  246|Homo sapiens RPL7L1 protein protein.
          Length = 246

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/69 (21%), Positives = 32/69 (46%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +++ + +P VPE++               +  L  +    K +   FKR E ++ +   +
Sbjct: 3   EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62

Query: 268 ERDEIRLAR 294
           +RD++RL R
Sbjct: 63  KRDKVRLRR 71


>AL590729-2|CAI14327.1|  189|Homo sapiens mitochondrial
           trans-2-enoyl-CoA reductase protein.
          Length = 189

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 50  KEVLRPR-KNL*RVKRTVRRCQLFRNQS*STVKGGRHSELAVFRSHSRGVPLP 205
           +E+ RP  KN  ++++   R +   NQ+    KG R SELA    +S+ + LP
Sbjct: 79  EELRRPEMKNFFKIRKLRLRKEEMLNQNHIVYKGSRESELASVSPNSKPLNLP 131


>AL035587-3|CAI21486.1|  246|Homo sapiens ribosomal protein L7-like
           1 protein.
          Length = 246

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/69 (21%), Positives = 32/69 (46%)
 Frame = +1

Query: 88  KEDSQTLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKELFKRAEQYVKEYRIK 267
           +++ + +P VPE++               +  L  +    K +   FKR E ++ +   +
Sbjct: 3   EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62

Query: 268 ERDEIRLAR 294
           +RD++RL R
Sbjct: 63  KRDKVRLRR 71


>BC112226-1|AAI12227.2|  637|Homo sapiens R3H domain containing 2
           protein.
          Length = 637

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 137 TVKGGRHSELAVFRSHSRGVPLPLRRGKNSLREPNNMSK 253
           T + GRHS+LA   +     P PL     SLR  N++S+
Sbjct: 578 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 616


>BC104995-1|AAI04996.2|  637|Homo sapiens R3H domain containing 2
           protein.
          Length = 637

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 137 TVKGGRHSELAVFRSHSRGVPLPLRRGKNSLREPNNMSK 253
           T + GRHS+LA   +     P PL     SLR  N++S+
Sbjct: 578 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 616


>BC041857-1|AAH41857.1|  681|Homo sapiens R3HDM2 protein protein.
          Length = 681

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 137 TVKGGRHSELAVFRSHSRGVPLPLRRGKNSLREPNNMSK 253
           T + GRHS+LA   +     P PL     SLR  N++S+
Sbjct: 622 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 660


>AB023219-1|BAA76846.2|  962|Homo sapiens KIAA1002 protein protein.
          Length = 962

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 137  TVKGGRHSELAVFRSHSRGVPLPLRRGKNSLREPNNMSK 253
            T + GRHS+LA   +     P PL     SLR  N++S+
Sbjct: 903  TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 941


>AF217973-1|AAG17216.1|  130|Homo sapiens unknown protein.
          Length = 130

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 300 AMSCQSDFITLLDAVFFDILFGSLKEFFPLLNGSGT-PLECDLKTASSECLP 148
           ++  + DF+  L  +FF   F  ++   P L  SGT    C+L    S   P
Sbjct: 11  SVDSRGDFLVFLCPIFFSFSFSEVESLSPRLECSGTISAHCNLCLLGSSYSP 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,861,535
Number of Sequences: 237096
Number of extensions: 970590
Number of successful extensions: 2662
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2661
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -