Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_J21
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.48 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.4  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -3

Query: 434 CDNRVKVVENQPESNKVIVVDNNNAPSCACTRNLEPVC 321
           C+ +    +   E++  +  D N AP C  T+ + P C
Sbjct: 135 CNGKPDCKDESDENSCTVETDPNRAPDCDPTQCVLPDC 172


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -3

Query: 434 CDNRVKVVENQPESNKVIVVDNNNAPSCAC 345
           C NR+ + ++ P  N     D+    +C C
Sbjct: 58  CQNRINLCDSSPCLNGATCQDHTTHYTCHC 87



 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/30 (30%), Positives = 10/30 (33%)
 Frame = -3

Query: 434 CDNRVKVVENQPESNKVIVVDNNNAPSCAC 345
           C   V      P  N+   V N N   C C
Sbjct: 96  CGEYVDWCSTNPCENQATCVQNKNQYQCLC 125


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +1

Query: 214 IWFFYALQGSCVTTVKWSPPWHRIMHS-LL*VTP 312
           IW  + L  + +T   W+P   R+  +  L VTP
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCERLARTEKLFVTP 499


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +1

Query: 214 IWFFYALQGSCVTTVKWSPPWHRIMHS-LL*VTP 312
           IW  + L  + +T   W+P   R+  +  L VTP
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCERLARTEKLFVTP 499


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +1

Query: 214 IWFFYALQGSCVTTVKWSPPWHRIMHS-LL*VTP 312
           IW  + L  + +T   W+P   R+  +  L VTP
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCERLARTEKLFVTP 499


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +1

Query: 214 IWFFYALQGSCVTTVKWSPPWHRIMHS-LL*VTP 312
           IW  + L  + +T   W+P   R+  +  L VTP
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCERLARTEKLFVTP 499


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,386
Number of Sequences: 336
Number of extensions: 2396
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)