Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_J21
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              38   8e-05
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   7.0  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   9.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 37.5 bits (83), Expect = 8e-05
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = -3

Query: 347 CTRNLEPVCASNGVTYNNECMMR---CHGGDHLT 255
           C R   PVCASNG  Y N C +    CH G  LT
Sbjct: 110 CPRRHRPVCASNGKIYANHCELHRAACHSGSSLT 143


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 410 PQPSLCCRKDPGVRCSSSGSTVWR 481
           P PS  CR         SGS +W+
Sbjct: 47  PIPSYACRGRCSSYLQVSGSKIWQ 70


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +2

Query: 410 PQPSLCCRKDPGVRCSSSGS 469
           P P+ CC       CS S S
Sbjct: 158 PIPASCCNSPENNTCSISNS 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,172
Number of Sequences: 438
Number of extensions: 2792
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)