Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_J20
(433 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98051-2|CAI42861.1| 878|Homo sapiens PHD finger protein 8 prot... 30 3.9
Z98051-1|CAI42860.1| 1060|Homo sapiens PHD finger protein 8 prot... 30 3.9
BC053861-1|AAH53861.1| 1024|Homo sapiens PHD finger protein 8 pr... 30 3.9
AL732374-7|CAI41582.1| 952|Homo sapiens PHD finger protein 8 pr... 30 3.9
AL732374-6|CAI41581.1| 658|Homo sapiens PHD finger protein 8 pr... 30 3.9
AL732374-2|CAI41577.1| 878|Homo sapiens PHD finger protein 8 pr... 30 3.9
AL732374-1|CAI41576.1| 1060|Homo sapiens PHD finger protein 8 pr... 30 3.9
AL589872-1|CAH70724.1| 1060|Homo sapiens PHD finger protein 8 pr... 30 3.9
AK021696-1|BAB13877.1| 790|Homo sapiens protein ( Homo sapiens ... 30 3.9
AB029034-1|BAA83063.1| 1084|Homo sapiens KIAA1111 protein protein. 30 3.9
>Z98051-2|CAI42861.1| 878|Homo sapiens PHD finger protein 8
protein.
Length = 878
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 221 TIMISMMKKKYR-RRRLNTSRLVL*PEFAGTSWWKMQHVMDMILGM 355
++ I M K Y +RL+T+ L P F W+ +H++D+ G+
Sbjct: 337 SLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL 382
>Z98051-1|CAI42860.1| 1060|Homo sapiens PHD finger protein 8
protein.
Length = 1060
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 221 TIMISMMKKKYR-RRRLNTSRLVL*PEFAGTSWWKMQHVMDMILGM 355
++ I M K Y +RL+T+ L P F W+ +H++D+ G+
Sbjct: 373 SLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL 418
>BC053861-1|AAH53861.1| 1024|Homo sapiens PHD finger protein 8
protein.
Length = 1024
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 221 TIMISMMKKKYR-RRRLNTSRLVL*PEFAGTSWWKMQHVMDMILGM 355
++ I M K Y +RL+T+ L P F W+ +H++D+ G+
Sbjct: 337 SLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL 382
>AL732374-7|CAI41582.1| 952|Homo sapiens PHD finger protein 8
protein.
Length = 952
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 221 TIMISMMKKKYR-RRRLNTSRLVL*PEFAGTSWWKMQHVMDMILGM 355
++ I M K Y +RL+T+ L P F W+ +H++D+ G+
Sbjct: 240 SLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL 285
>AL732374-6|CAI41581.1| 658|Homo sapiens PHD finger protein 8
protein.
Length = 658
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 221 TIMISMMKKKYR-RRRLNTSRLVL*PEFAGTSWWKMQHVMDMILGM 355
++ I M K Y +RL+T+ L P F W+ +H++D+ G+
Sbjct: 100 SLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL 145
>AL732374-2|CAI41577.1| 878|Homo sapiens PHD finger protein 8
protein.
Length = 878
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 221 TIMISMMKKKYR-RRRLNTSRLVL*PEFAGTSWWKMQHVMDMILGM 355
++ I M K Y +RL+T+ L P F W+ +H++D+ G+
Sbjct: 337 SLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL 382
>AL732374-1|CAI41576.1| 1060|Homo sapiens PHD finger protein 8
protein.
Length = 1060
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 221 TIMISMMKKKYR-RRRLNTSRLVL*PEFAGTSWWKMQHVMDMILGM 355
++ I M K Y +RL+T+ L P F W+ +H++D+ G+
Sbjct: 373 SLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL 418
>AL589872-1|CAH70724.1| 1060|Homo sapiens PHD finger protein 8
protein.
Length = 1060
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 221 TIMISMMKKKYR-RRRLNTSRLVL*PEFAGTSWWKMQHVMDMILGM 355
++ I M K Y +RL+T+ L P F W+ +H++D+ G+
Sbjct: 373 SLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL 418
>AK021696-1|BAB13877.1| 790|Homo sapiens protein ( Homo sapiens
cDNA FLJ11634 fis, clone HEMBA1004275, moderately
similar to Homo sapiens PHD-finger protein (GRC5) mRNA.
).
Length = 790
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 221 TIMISMMKKKYR-RRRLNTSRLVL*PEFAGTSWWKMQHVMDMILGM 355
++ I M K Y +RL+T+ L P F W+ +H++D+ G+
Sbjct: 337 SLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL 382
>AB029034-1|BAA83063.1| 1084|Homo sapiens KIAA1111 protein protein.
Length = 1084
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 221 TIMISMMKKKYR-RRRLNTSRLVL*PEFAGTSWWKMQHVMDMILGM 355
++ I M K Y +RL+T+ L P F W+ +H++D+ G+
Sbjct: 397 SLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL 442
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,844,421
Number of Sequences: 237096
Number of extensions: 868634
Number of successful extensions: 1643
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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