Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_J18
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA... 56 1e-08
U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA... 56 1e-08
AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein ( Cae... 36 0.011
AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin ... 36 0.011
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 34 0.059
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 34 0.059
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 34 0.059
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 32 0.18
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 32 0.18
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 0.73
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 30 0.73
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 30 0.73
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 30 0.73
Z75711-11|CAB00038.1| 755|Caenorhabditis elegans Hypothetical p... 30 0.96
Z75710-10|CAB00029.1| 755|Caenorhabditis elegans Hypothetical p... 30 0.96
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 29 1.3
Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical pr... 28 2.9
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 28 2.9
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 28 2.9
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 28 3.9
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 28 3.9
Z83102-11|CAB05470.1| 310|Caenorhabditis elegans Hypothetical p... 27 5.1
Z81492-11|CAB04035.1| 310|Caenorhabditis elegans Hypothetical p... 27 5.1
Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 27 5.1
AY204203-1|AAO39204.1| 391|Caenorhabditis elegans nuclear recep... 27 5.1
AY079166-1|AAL86013.1| 311|Caenorhabditis elegans heat shock-li... 27 5.1
AL132858-5|CAB60481.1| 311|Caenorhabditis elegans Hypothetical ... 27 5.1
AF016675-6|AAF02171.2| 391|Caenorhabditis elegans Nuclear hormo... 27 5.1
Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical pr... 27 6.8
AL110484-18|CAB54409.1| 357|Caenorhabditis elegans Hypothetical... 27 6.8
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 27 9.0
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 9.0
AC006692-8|AAF39973.1| 431|Caenorhabditis elegans Hypothetical ... 27 9.0
>U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA-2
protein, isoform b protein.
Length = 583
Score = 56.0 bits (129), Expect = 1e-08
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 226 IECYECDINLCTNCFASGKEVGRHKNDHKY-AVRRNDLPLFENCNWSAKEESQLLSALST 402
++C+EC + +C CF G E H+ H Y V+ P E +W+ ++E +LL A
Sbjct: 24 VKCFECPLRICILCFQCGAESPPHRRGHNYELVKPTSNP--EAMSWTHEDEFELLKAAHK 81
Query: 403 YGFGNWEDISKSV 441
+ GNW +I++S+
Sbjct: 82 FKMGNWGEIAESI 94
>U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA-2
protein, isoform a protein.
Length = 596
Score = 56.0 bits (129), Expect = 1e-08
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 226 IECYECDINLCTNCFASGKEVGRHKNDHKY-AVRRNDLPLFENCNWSAKEESQLLSALST 402
++C+EC + +C CF G E H+ H Y V+ P E +W+ ++E +LL A
Sbjct: 37 VKCFECPLRICILCFQCGAESPPHRRGHNYELVKPTSNP--EAMSWTHEDEFELLKAAHK 94
Query: 403 YGFGNWEDISKSV 441
+ GNW +I++S+
Sbjct: 95 FKMGNWGEIAESI 107
>AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein (
Caenorhabditis elegansmRNA for dystrobrevin. ).
Length = 590
Score = 36.3 bits (80), Expect = 0.011
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +1
Query: 151 RPAKMSNDILQTRCDVCSEIAHEPF-IECYEC-DINLCTNCFASGKEVGRHKNDHKYAVR 324
R A +SN CD C + F +C C + LC +CF G+ H N+H+
Sbjct: 251 RMASVSNVYHPVVCDACQVRSFTGFRYKCQRCANYQLCQSCFWRGRTSQNHSNEHEMKEY 310
Query: 325 RNDLPLFENCNWSAKEESQLLSALSTYGFGN 417
+ + S + Q + A ST G N
Sbjct: 311 SSYKSPTKQLVHSIHKSLQCIPATSTVGDAN 341
>AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin
homolog protein 1 protein.
Length = 590
Score = 36.3 bits (80), Expect = 0.011
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +1
Query: 151 RPAKMSNDILQTRCDVCSEIAHEPF-IECYEC-DINLCTNCFASGKEVGRHKNDHKYAVR 324
R A +SN CD C + F +C C + LC +CF G+ H N+H+
Sbjct: 251 RMASVSNVYHPVVCDACQVRSFTGFRYKCQRCANYQLCQSCFWRGRTSQNHSNEHEMKEY 310
Query: 325 RNDLPLFENCNWSAKEESQLLSALSTYGFGN 417
+ + S + Q + A ST G N
Sbjct: 311 SSYKSPTKQLVHSIHKSLQCIPATSTVGDAN 341
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 33.9 bits (74), Expect = 0.059
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 211 AHEPFIECYECDINLCTNCFASGKEVGRHKNDHKYAVRRNDLP 339
AHE E + CD+ CT F++G+++ HK A R +P
Sbjct: 123 AHEDEQEIFSCDV--CTTTFSNGQDIREHKCQKTLASRSTSVP 163
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 33.9 bits (74), Expect = 0.059
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 211 AHEPFIECYECDINLCTNCFASGKEVGRHKNDHKYAVRRNDLP 339
AHE E + CD+ CT F++G+++ HK A R +P
Sbjct: 94 AHEDEQEIFSCDV--CTTTFSNGQDIREHKCQKTLASRSTSVP 134
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 33.9 bits (74), Expect = 0.059
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 211 AHEPFIECYECDINLCTNCFASGKEVGRHKNDHKYAVRRNDLP 339
AHE E + CD+ CT F++G+++ HK A R +P
Sbjct: 123 AHEDEQEIFSCDV--CTTTFSNGQDIREHKCQKTLASRSTSVP 163
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 358 WSAKEESQLLSALSTYGFGNWEDISKSVHTRSKLECQ 468
W+ +E+ L+ A+S YG +W ++++V R+ +C+
Sbjct: 359 WTDQEDVLLVCAVSRYGAKDWAKVAQAVQNRNDSQCR 395
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 358 WSAKEESQLLSALSTYGFGNWEDISKSVHTRSKLECQ 468
W+ +E+ L+ A+S YG +W ++++V R+ +C+
Sbjct: 359 WTDQEDVLLVCAVSRYGAKDWAKVAQAVQNRNDSQCR 395
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 30.3 bits (65), Expect = 0.73
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 355 NWSAKEESQLLSALSTYGFGNWEDI 429
+WS ++S LL + YG+G+WE I
Sbjct: 1155 DWSRPDDSALLLGVWKYGYGSWEAI 1179
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.3 bits (65), Expect = 0.73
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 226 IECYECDINLCTNCFASGKEVGRHKNDH 309
+ C+ CD LC NCF S + H+ +H
Sbjct: 3322 LTCFNCD--LCQNCFFSQRTAKSHRTNH 3347
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.3 bits (65), Expect = 0.73
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 226 IECYECDINLCTNCFASGKEVGRHKNDH 309
+ C+ CD LC NCF S + H+ +H
Sbjct: 3322 LTCFNCD--LCQNCFFSQRTAKSHRTNH 3347
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 30.3 bits (65), Expect = 0.73
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 226 IECYECDINLCTNCFASGKEVGRHKNDH 309
+ C+ CD LC NCF S + H+ +H
Sbjct: 3322 LTCFNCD--LCQNCFFSQRTAKSHRTNH 3347
>Z75711-11|CAB00038.1| 755|Caenorhabditis elegans Hypothetical
protein D1081.8 protein.
Length = 755
Score = 29.9 bits (64), Expect = 0.96
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 358 WSAKEESQLLSALSTYGFGNWEDISKSVHTRSKLECQ 468
W E+ L +A+ YG W I+ +H +S +C+
Sbjct: 11 WKNTEDEILKAAIMKYGKNQWSRIASLLHRKSAKQCK 47
>Z75710-10|CAB00029.1| 755|Caenorhabditis elegans Hypothetical
protein D1081.8 protein.
Length = 755
Score = 29.9 bits (64), Expect = 0.96
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 358 WSAKEESQLLSALSTYGFGNWEDISKSVHTRSKLECQ 468
W E+ L +A+ YG W I+ +H +S +C+
Sbjct: 11 WKNTEDEILKAAIMKYGKNQWSRIASLLHRKSAKQCK 47
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 175 ILQTRCDVCSEIAHEPFIECYECDINLCTNCFAS 276
+L CD SE H I C CD NLC C S
Sbjct: 103 LLNLECDEDSE--HVAVIYCTVCDSNLCERCSES 134
>Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical
protein F41D3.3 protein.
Length = 348
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = +1
Query: 94 GILCIRCRSIFRRNLESVLRPAKMSNDILQTRCDVCSEIAHEPFIECYECDINLCTNCFA 273
GI C C S FRR + +R L + + CS I+ + I C C C
Sbjct: 26 GICCPACASFFRRTVSLNIR-------YLCKKQNNCSGISKKYHIVCRACRYEKCIKKAG 78
Query: 274 SGKEVGRHKNDHK 312
+ + +HK K
Sbjct: 79 MKRSLVQHKQSDK 91
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +1
Query: 163 MSNDILQTRCDVCSEIAH---EPFIECYECDINLCTNCFASGKEVGRHKNDHKYAVR 324
MS+D+ + S H PF + YE + L + FA + V K KYA +
Sbjct: 1 MSDDVNSSATSTSSSTVHFDDTPFEDVYEIETELGSGQFAVVRRVRDRKTGEKYAAK 57
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +1
Query: 163 MSNDILQTRCDVCSEIAH---EPFIECYECDINLCTNCFASGKEVGRHKNDHKYAVR 324
MS+D+ + S H PF + YE + L + FA + V K KYA +
Sbjct: 1 MSDDVNSSATSTSSSTVHFDDTPFEDVYEIETELGSGQFAVVRRVRDRKTGEKYAAK 57
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 244 DINLCTNCFASGKEVGRHKNDHKYAVRRNDLPLFENCNWSA 366
DI++ NC A K + ND K+ NDL F N+SA
Sbjct: 746 DIDMLQNCDAIVKRSIVNYNDFKFRTVANDLTQFLQRNFSA 786
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 244 DINLCTNCFASGKEVGRHKNDHKYAVRRNDLPLFENCNWSA 366
DI++ NC A K + ND K+ NDL F N+SA
Sbjct: 746 DIDMLQNCDAIVKRSIVNYNDFKFRTVANDLTQFLQRNFSA 786
>Z83102-11|CAB05470.1| 310|Caenorhabditis elegans Hypothetical
protein E03H4.13 protein.
Length = 310
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 55 CFII*QVSG-RVHAGIL-CIRCRSIFRRNLE-SVLRPAKMSNDILQTRCDVCSEIAHEPF 225
C + V G R H GI C+ C S FRR+L PA S IL + C +
Sbjct: 8 CRVCHSVKGTRRHFGITACMSCSSFFRRSLNCKFYCPANNSCTILDDQKQFCRSCRYNKC 67
Query: 226 IE 231
++
Sbjct: 68 VQ 69
>Z81492-11|CAB04035.1| 310|Caenorhabditis elegans Hypothetical
protein E03H4.13 protein.
Length = 310
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 55 CFII*QVSG-RVHAGIL-CIRCRSIFRRNLE-SVLRPAKMSNDILQTRCDVCSEIAHEPF 225
C + V G R H GI C+ C S FRR+L PA S IL + C +
Sbjct: 8 CRVCHSVKGTRRHFGITACMSCSSFFRRSLNCKFYCPANNSCTILDDQKQFCRSCRYNKC 67
Query: 226 IE 231
++
Sbjct: 68 VQ 69
>Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical
protein F23A7.5 protein.
Length = 632
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 404 YVESADSNWLSSFADQLQFSNNGKSFRLTAY 312
Y++SA + S+ ++ +F N+GK R T Y
Sbjct: 126 YIDSATDDDYDSYKERKKFENSGKRRRCTPY 156
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 27.5 bits (58), Expect = 5.1
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Frame = +1
Query: 139 ESVLRPAKMSNDILQTRCDVCSEIAHEP-FIECYECDINLCTNCFASGKEVGRHKNDHKY 315
ES+ P K+ +I + D + ++H+P I+ D+++ A RH + K
Sbjct: 56 ESLFPPGKLE-EIARMIIDEPTPVSHDPDMIKIRNADLDVKIRKQAETYVTLRHAHQQKV 114
Query: 316 AVRRN-----DLPLFENCNWSAKEESQLLSALSTYGFGNWEDI 429
RR + LF+ +E YG+ +WED+
Sbjct: 115 QRRRFSECFLNTVLFDEKGLRIADEVMFNYDKELYGYSHWEDL 157
>AY204203-1|AAO39204.1| 391|Caenorhabditis elegans nuclear receptor
NHR-115 protein.
Length = 391
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 37 KTSIFECFII*QVSGRVHAGIL-CIRCRSIFRRNLES 144
K +F C I Q S H GI+ C C + FRR++ S
Sbjct: 2 KKVLFPCQICGQNSHGTHFGIVSCRACAAFFRRSVNS 38
>AY079166-1|AAL86013.1| 311|Caenorhabditis elegans heat shock-like
protein protein.
Length = 311
Score = 27.5 bits (58), Expect = 5.1
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +1
Query: 205 EIAHEPFIECYECDINLCTNCFASGKEVGRHKNDHKYAVRRNDLPLFENCNWSAK--EES 378
E P+IE Y+ ++N NC EV K + N L ++ W K E
Sbjct: 133 ETVTRPYIEKYQLNLNWVYNCLEKRSEV--DKIVFEDPDNENGFVLLQDIKWDGKTLENL 190
Query: 379 QLLSALSTYGFGNWEDIS 432
+L+ +G + D++
Sbjct: 191 YVLAICHRHGLKSVRDLT 208
>AL132858-5|CAB60481.1| 311|Caenorhabditis elegans Hypothetical
protein Y113G7A.9 protein.
Length = 311
Score = 27.5 bits (58), Expect = 5.1
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +1
Query: 205 EIAHEPFIECYECDINLCTNCFASGKEVGRHKNDHKYAVRRNDLPLFENCNWSAK--EES 378
E P+IE Y+ ++N NC EV K + N L ++ W K E
Sbjct: 133 ETVTRPYIEKYQLNLNWVYNCLEKRSEV--DKIVFEDPDNENGFVLLQDIKWDGKTLENL 190
Query: 379 QLLSALSTYGFGNWEDIS 432
+L+ +G + D++
Sbjct: 191 YVLAICHRHGLKSVRDLT 208
>AF016675-6|AAF02171.2| 391|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 115 protein.
Length = 391
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 37 KTSIFECFII*QVSGRVHAGIL-CIRCRSIFRRNLES 144
K +F C I Q S H GI+ C C + FRR++ S
Sbjct: 2 KKVLFPCQICGQNSHGTHFGIVSCRACAAFFRRSVNS 38
>Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical
protein ZK1037.13 protein.
Length = 370
Score = 27.1 bits (57), Expect = 6.8
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +1
Query: 79 GRVHAGILCIRCRSIFRRNLESVLRPAKMSNDILQTRCDVCSEIAHEPFIECYECDINLC 258
G + + C+ C + FRR + S + + Q+ C EI HE C C + C
Sbjct: 52 GHRYGPMACLSCITFFRRAISS----GNVGDCKKQSAC----EINHESKNSCRSCRLQKC 103
Query: 259 TNCFASGKEVGRHKN 303
N + K + +H++
Sbjct: 104 LNVGMNPKAI-QHRD 117
>AL110484-18|CAB54409.1| 357|Caenorhabditis elegans Hypothetical
protein Y38E10A.18 protein.
Length = 357
Score = 27.1 bits (57), Expect = 6.8
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 55 CFII*QVSGRVHAG-ILCIRCRSIFRRNLESVLR-PAKMSNDILQTRCDVCSEIAHEPFI 228
C + G +H G ++C+ C S FRR + +R + SN+ C + ++ FI
Sbjct: 13 CLVCGIEKGTLHFGSVVCMACASFFRRTVSFHIRFLCRYSNN-----CQISQDLR---FI 64
Query: 229 ECYECDINLCTNCFASGKEVGRHKNDHK 312
C C + C V + +N++K
Sbjct: 65 -CRSCRFDKCERVGMRRDLVQQKRNENK 91
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 157 AKMSNDILQTRCDVCSEIAHEPF-IECYECDINLCTNC 267
+ S+D ++C +C + + C +CDI CT C
Sbjct: 197 SSQSSDEASSQCQLCEGSENRMANVFCEQCDIYYCTPC 234
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 26.6 bits (56), Expect = 9.0
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 337 PLFENCNWSAKEESQLLSALSTYG 408
P++ NW+ +EE + + + +YG
Sbjct: 2059 PVYNKLNWTKREEQEFIRVVRSYG 2082
>AC006692-8|AAF39973.1| 431|Caenorhabditis elegans Hypothetical
protein T28F12.1 protein.
Length = 431
Score = 26.6 bits (56), Expect = 9.0
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 199 CSEIAHEPFIECYECDINLCTNCFASGKEV-GRHKNDHKYAVRRNDLPLFENCNWSAKEE 375
C ++ + I L T F S + G H+N R + +N ++EE
Sbjct: 39 CKKLKKHQTLAAIGLFIFLMTFTFVSNSQASGEHQNGRWAEGRTIEKRSVKNV--ISEEE 96
Query: 376 SQLLSALSTYGFGNWEDISKSVHTRSK 456
S+ LS LST GF + D + + K
Sbjct: 97 SKCLSLLSTTGFSDCPDFCSVLAAKLK 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,991,280
Number of Sequences: 27780
Number of extensions: 232196
Number of successful extensions: 767
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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