Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_J13
(410 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 150 9e-36
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 114 8e-25
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 93 2e-18
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 91 1e-17
UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1; ... 71 9e-12
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 70 2e-11
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 67 1e-10
UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4; Apicomp... 66 3e-10
UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato... 63 2e-09
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 58 9e-08
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 54 9e-07
UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148, w... 45 5e-04
UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4; Pyroba... 38 0.080
UniRef50_Q96387 Cluster: Receptor-like protein kinase precursor;... 33 1.7
UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1; Hypert... 33 2.3
UniRef50_Q1YII8 Cluster: Possible regulatory protein; n=1; Auran... 33 3.0
UniRef50_A1RYY6 Cluster: Small subunit ribosomal protein S25e; n... 33 3.0
UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropy... 32 4.0
UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S riboso... 32 5.2
UniRef50_UPI0000ECA23F Cluster: UPI0000ECA23F related cluster; n... 32 5.2
UniRef50_Q1D826 Cluster: Patatin-like phospholipase family prote... 31 6.9
UniRef50_A1RH83 Cluster: Putative uncharacterized protein; n=4; ... 31 6.9
UniRef50_Q3SA53 Cluster: Dicer-like 4; n=2; core eudicotyledons|... 31 6.9
UniRef50_P84634 Cluster: Dicer-like protein 4; n=1; Arabidopsis ... 31 6.9
UniRef50_Q5TJB1 Cluster: Putative uncharacterized protein; n=3; ... 31 9.1
UniRef50_Q3XXC9 Cluster: Regulatory protein, GntR:Bacterial regu... 31 9.1
UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillar... 31 9.1
UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.0... 31 9.1
UniRef50_A3LS16 Cluster: Predicted protein; n=2; Saccharomycetac... 31 9.1
UniRef50_P13185 Cluster: Protein kinase KIN1; n=2; Saccharomyces... 31 9.1
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 150 bits (364), Expect = 9e-36
Identities = 76/113 (67%), Positives = 82/113 (72%)
Frame = +3
Query: 3 KKDTKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQ 182
KKD K+SAKQPQ LNNQVLFDK TYEKLYKEVP
Sbjct: 4 KKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPA 63
Query: 183 YKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYTRATKGDD 341
YKLITP+VVSERLKIRGSLA+RAL+ELR+KGLIKQVVQHH QVIYTRATKGD+
Sbjct: 64 YKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 114 bits (274), Expect = 8e-25
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +3
Query: 120 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQH 299
LNN VLFDK TY+KL KEVP YKLITPAVVSERLKIRGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 300 HGQVIYTRATKGDDPVA 350
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 93.1 bits (221), Expect = 2e-18
Identities = 44/70 (62%), Positives = 55/70 (78%)
Frame = +3
Query: 120 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQH 299
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL+I GSLARRA+ +L +GLI+ V H
Sbjct: 163 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIRMVSVH 222
Query: 300 HGQVIYTRAT 329
Q IYTRAT
Sbjct: 223 SSQQIYTRAT 232
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 90.6 bits (215), Expect = 1e-17
Identities = 41/69 (59%), Positives = 54/69 (78%)
Frame = +3
Query: 123 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHH 302
NN V+ DK Y+++ KEVP YKLI+ +V+ +R+KI GSLARRA+ L +GLIK+VV HH
Sbjct: 37 NNAVIVDKAVYDRIIKEVPTYKLISQSVLIDRMKINGSLARRAIAFLEKEGLIKRVVHHH 96
Query: 303 GQVIYTRAT 329
Q+IYTRAT
Sbjct: 97 AQLIYTRAT 105
>UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1;
Babesia bovis|Rep: Ribosomal protein S25 , putative -
Babesia bovis
Length = 104
Score = 70.9 bits (166), Expect = 9e-12
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +3
Query: 123 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVV-QH 299
N+ V FDK TY+KL ++P+ +LIT + + ++LK+ S+AR+AL L ++ LIK V QH
Sbjct: 36 NHAVFFDKATYDKLMSDIPKARLITISTIVDKLKVNASMARKALAHLEEQKLIKPVCDQH 95
Query: 300 HGQVIYTRA 326
H Q +YT+A
Sbjct: 96 HAQRLYTKA 104
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 69.7 bits (163), Expect = 2e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +3
Query: 132 VLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQV 311
V+ D+ Y+++ KEVP Y+ ++ +V+ +RLKI GSLAR AL L +G+IK + +H Q
Sbjct: 40 VILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPISKHSKQA 99
Query: 312 IYTRATKGD 338
IYTRAT +
Sbjct: 100 IYTRATASE 108
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 67.3 bits (157), Expect = 1e-10
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = +3
Query: 120 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQH 299
L N V+FDK TY+KL EVP+YKLITP+++S+RLKI S+A L +L + LI+ V
Sbjct: 36 LQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQLCREKLIRLVSCS 95
Query: 300 HGQVIYTR 323
+YTR
Sbjct: 96 SKTRVYTR 103
>UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4;
Apicomplexa|Rep: 40S ribosomal protein S25 -
Cryptosporidium parvum Iowa II
Length = 106
Score = 66.1 bits (154), Expect = 3e-10
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +3
Query: 123 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQV-VQH 299
N+ VLFDK T ++ + +V + +L+TPAVV +LK+ S AR L + KG+IK V Q
Sbjct: 38 NHSVLFDKKTADRFHSDVLKSRLLTPAVVVNQLKVNASAARAMLRDCESKGIIKPVGEQT 97
Query: 300 HGQVIYTRA 326
HGQ+IYT+A
Sbjct: 98 HGQMIYTKA 106
>UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato
sp|P46301|RS25_LYCES 40S ribosomal protein S25 p; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S25,
cytosolic-tomato sp|P46301|RS25_LYCES 40S ribosomal
protein S25 p - Ostreococcus tauri
Length = 82
Score = 62.9 bits (146), Expect = 2e-09
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +3
Query: 150 TYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYT 320
TY+KL EVP+YK+IT AV+ +RL+I SLAR+ + L+ KGLIK +V H +YT
Sbjct: 20 TYDKLLAEVPKYKMITTAVLCDRLRITCSLARKGIAILQAKGLIKPLVSHAALNVYT 76
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 57.6 bits (133), Expect = 9e-08
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 120 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQV-VQ 296
LNN V+FDK T +K K+VP K+ITP VV++R+ I G+L + L L K LI V V
Sbjct: 39 LNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKKELIVPVKVD 98
Query: 297 HHGQVIYTRATK 332
+H +V ++R+ K
Sbjct: 99 YHIRV-FSRSDK 109
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 54.4 bits (125), Expect = 9e-07
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +3
Query: 216 RLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYTRATKGDD 341
RL+IRGSLAR AL EL KGLIK V +H +VIYTR TK D
Sbjct: 53 RLEIRGSLARAALQELLGKGLIKLVSKHRARVIYTRNTKSGD 94
>UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_148,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 204
Score = 45.2 bits (102), Expect = 5e-04
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +3
Query: 120 LNNQVLFDKPTYEKLYKEVPQY-KLITPAVVSERLKIRGSLARRALVELRDKGLIKQV-V 293
LNN V D +Y+++ ++P+ LIT + VS++ K+ GSLARR + GL+
Sbjct: 103 LNNAVFLDNTSYKQIETQLPKMGALITVSTVSDKFKVNGSLARRCIRHFAKSGLLVPAGD 162
Query: 294 QHHGQVIYT 320
Q+ Q I+T
Sbjct: 163 QNSKQYIFT 171
>UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S25e -
Pyrobaculum aerophilum
Length = 110
Score = 37.9 bits (84), Expect = 0.080
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +3
Query: 129 QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQ 308
QVL D+ ++ + KEV ++ITP ++ + I+ S+A + L L+++G + V + H
Sbjct: 43 QVL-DEKVFQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERGDLVLVAKGHRT 101
Query: 309 VIYTRATK 332
IY A +
Sbjct: 102 EIYVPAKR 109
>UniRef50_Q96387 Cluster: Receptor-like protein kinase precursor;
n=1; Catharanthus roseus|Rep: Receptor-like protein
kinase precursor - Catharanthus roseus (Rosy periwinkle)
(Madagascar periwinkle)
Length = 803
Score = 33.5 bits (73), Expect = 1.7
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = -2
Query: 199 GVISLY-CGTSLYS-FSYVGLSNNTWLFNLSRTFPFD---HFFFLALPPPDPSFFFWVF 38
G S+Y GT L+S F N TWLFN+ F + HF L P P+ +FFF VF
Sbjct: 258 GPSSVYGTGTKLHSVFDPNTQINATWLFNVDSGFGYFIRFHFCNLLNPIPNNNFFFNVF 316
>UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1;
Hyperthermus butylicus DSM 5456|Rep: 30S ribosomal
protein S25e - Hyperthermus butylicus (strain DSM 5456 /
JCM 9403)
Length = 76
Score = 33.1 bits (72), Expect = 2.3
Identities = 13/44 (29%), Positives = 29/44 (65%)
Frame = +3
Query: 153 YEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIK 284
Y+++ +EV + +TP +++E+ + SLAR+ L L +G+++
Sbjct: 18 YKRIAREVKRESFVTPYMLAEKYNMTISLARQVLKRLAKEGIVE 61
>UniRef50_Q1YII8 Cluster: Possible regulatory protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Possible regulatory
protein - Aurantimonas sp. SI85-9A1
Length = 344
Score = 32.7 bits (71), Expect = 3.0
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 174 VPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQV 290
+P +T ++++ERL I + RRAL EL +GL+K+V
Sbjct: 41 LPALGHLTESLLAERLGISRAPVRRALSELEQQGLVKRV 79
>UniRef50_A1RYY6 Cluster: Small subunit ribosomal protein S25e; n=1;
Thermofilum pendens Hrk 5|Rep: Small subunit ribosomal
protein S25e - Thermofilum pendens (strain Hrk 5)
Length = 112
Score = 32.7 bits (71), Expect = 3.0
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 156 EKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYTRATK 332
E + KE+ K +TP V++ + ++ S A++ L EL +G++ ++ IY K
Sbjct: 48 EHVIKEIRGLKYVTPYVLASKFSLKLSRAKKVLRELESRGVVVAYDKNSRVPIYVPVAK 106
>UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S25e - Aeropyrum
pernix
Length = 103
Score = 32.3 bits (70), Expect = 4.0
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +3
Query: 156 EKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIY 317
E+ KEV + + +TP +++++ ++ S+ARR L L ++G++ ++ +Y
Sbjct: 36 EQARKEVARERWVTPHKLAQKMGVKVSIARRVLRILEEEGVLVLFTRNRRSPLY 89
>UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Rattus norvegicus
Length = 93
Score = 31.9 bits (69), Expect = 5.2
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 258 ELRDKGLIKQVVQHHGQVIYTRATKGDDPVA 350
EL +GL K V +H QV+ TR TKG D A
Sbjct: 58 ELLSEGLSKLVSKHRAQVVDTRNTKGGDAPA 88
>UniRef50_UPI0000ECA23F Cluster: UPI0000ECA23F related cluster; n=1;
Gallus gallus|Rep: UPI0000ECA23F UniRef100 entry -
Gallus gallus
Length = 222
Score = 31.9 bits (69), Expect = 5.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 227 PRLPCQESTCRT*R*RFNQTSSPTPWAGDL 316
P+ PC STC T++PTPWA L
Sbjct: 31 PKHPCTPSTCEMQHPAVLSTAAPTPWASSL 60
>UniRef50_Q1D826 Cluster: Patatin-like phospholipase family protein;
n=1; Myxococcus xanthus DK 1622|Rep: Patatin-like
phospholipase family protein - Myxococcus xanthus
(strain DK 1622)
Length = 481
Score = 31.5 bits (68), Expect = 6.9
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 141 DKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVV 293
D P+ L KE ++++ P E +R SLA ALV+LR++ +++ V+
Sbjct: 5 DGPSKHVLLKE--RFQITRPLEEMELRLVRASLANAALVDLREEAILRTVL 53
>UniRef50_A1RH83 Cluster: Putative uncharacterized protein; n=4;
Shewanella|Rep: Putative uncharacterized protein -
Shewanella sp. (strain W3-18-1)
Length = 61
Score = 31.5 bits (68), Expect = 6.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 191 DHTRCCL*KVEDPRLPCQESTCRT*R*RFNQTSSPT 298
++ RCC+ ++EDP L + S+C T Q SSPT
Sbjct: 24 ENRRCCMPRLEDPPLVSKRSSCLT---EDKQVSSPT 56
>UniRef50_Q3SA53 Cluster: Dicer-like 4; n=2; core eudicotyledons|Rep:
Dicer-like 4 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1702
Score = 31.5 bits (68), Expect = 6.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 299 VLDYLFD*TFISKFDKCSPGKGASDLQPFR-DNSGCDQLVLWYFLIQFLICGFVKQHLVV 123
VLDYL F + F K PG+ +DL+ +N + + + L +FL C + H V+
Sbjct: 1336 VLDYLMTSYFFTVFPKLKPGQ-LTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVI 1394
Query: 122 *LVTDF 105
T+F
Sbjct: 1395 EDYTNF 1400
>UniRef50_P84634 Cluster: Dicer-like protein 4; n=1; Arabidopsis
thaliana|Rep: Dicer-like protein 4 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1589
Score = 31.5 bits (68), Expect = 6.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 299 VLDYLFD*TFISKFDKCSPGKGASDLQPFR-DNSGCDQLVLWYFLIQFLICGFVKQHLVV 123
VLDYL F + F K PG+ +DL+ +N + + + L +FL C + H V+
Sbjct: 1265 VLDYLMTSYFFTVFPKLKPGQ-LTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVI 1323
Query: 122 *LVTDF 105
T+F
Sbjct: 1324 EDYTNF 1329
>UniRef50_Q5TJB1 Cluster: Putative uncharacterized protein; n=3;
Rudivirus|Rep: Putative uncharacterized protein -
Sulfolobus islandicus rudivirus 1 variant XX
Length = 399
Score = 31.1 bits (67), Expect = 9.1
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 223 FNLSETTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRT-FPFDHFFFLALPPPDPSFFF 47
FN+S G++ ++ + +F+Y+ L N+ LF++ T F F L +P F+
Sbjct: 303 FNISFGLDGLLFIFWNFIIVAFAYLKLMNDKKLFSIVLTSLAIQIFLFFYLGYQNPIFYK 362
Query: 46 WVFCG 32
+V G
Sbjct: 363 FVIAG 367
>UniRef50_Q3XXC9 Cluster: Regulatory protein, GntR:Bacterial
regulatory protein, GntR; n=2; Enterococcus faecium
DO|Rep: Regulatory protein, GntR:Bacterial regulatory
protein, GntR - Enterococcus faecium DO
Length = 228
Score = 31.1 bits (67), Expect = 9.1
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 120 LNN--QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVV 293
+NN Q ++ + +Y E+ I+ V+ E+L I + R AL++LR++ L+K +
Sbjct: 3 INNLQQQAYESIRKQIIYSELAPGSKISDKVLEEQLAIGRTPIREALIQLRNQELVKTIP 62
Query: 294 Q 296
Q
Sbjct: 63 Q 63
>UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillardia
theta|Rep: 40S ribosomal protein S25 - Guillardia theta
(Cryptomonas phi)
Length = 87
Score = 31.1 bits (67), Expect = 9.1
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +3
Query: 123 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVEL 263
NNQ+ +K Y+K+ E+ + K ++ +S + +I+ SL ++ + L
Sbjct: 19 NNQIYIEKSLYQKIIDELNKEKFVSFTSLSSKYRIKISLIKKIINHL 65
>UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.080;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein 94C8.080 - Neurospora crassa
Length = 1565
Score = 31.1 bits (67), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 148 GLSNNTWLFNLSRTFPFDHFFFLALPPPDPS 56
GL N+ W F + T+P FF L+ PP P+
Sbjct: 1290 GLGNDDWSFYAAETYPAATFFNLSPRPPRPA 1320
>UniRef50_A3LS16 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 540
Score = 31.1 bits (67), Expect = 9.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 223 FNLSETTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFL-ALP 71
FNL+ G+ ++ G+S +F+ +G+ + W F + P D FL ALP
Sbjct: 145 FNLTFLITGIFAVVAGSSP-TFAAIGVFDAFWSFGVGGNLPVDSAIFLEALP 195
>UniRef50_P13185 Cluster: Protein kinase KIN1; n=2; Saccharomyces
cerevisiae|Rep: Protein kinase KIN1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 1064
Score = 31.1 bits (67), Expect = 9.1
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +3
Query: 129 QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQ 308
+V FD L++++ Q K+ P +S +++ L++ +V+ + + +KQVV+HH
Sbjct: 341 KVPFDDENSSVLHEKIKQGKVEYPQHLS--IEVISLLSKMLVVDPKRRATLKQVVEHHWM 398
Query: 309 V 311
V
Sbjct: 399 V 399
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,321,884
Number of Sequences: 1657284
Number of extensions: 5660510
Number of successful extensions: 16965
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16956
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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