Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_J11
         (329 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70852-4|AAK29816.2|   93|Caenorhabditis elegans Hypothetical pr...    26   5.5  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    26   5.5  
Z98860-1|CAB11544.1|  677|Caenorhabditis elegans Hypothetical pr...    26   7.3  
AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine r...    26   7.3  
AC199240-1|ABO33278.1|  427|Caenorhabditis elegans Hypothetical ...    26   7.3  
Z49911-6|CAA90132.1|  831|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p...    25   9.7  
AC006618-6|AAK68247.1|  107|Caenorhabditis elegans Hypothetical ...    25   9.7  

>U70852-4|AAK29816.2|   93|Caenorhabditis elegans Hypothetical
           protein F45E4.5 protein.
          Length = 93

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 163 WSSRRYSGPGHGF 201
           W   RYS PGHGF
Sbjct: 40  WGRPRYSPPGHGF 52


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +3

Query: 171 PSLQWPRPRLWLKENNHS---LTFLCIFSCLYNHIFCIIY 281
           P L WP  R  +  N      LTF+CI S   N + C +Y
Sbjct: 598 PKLLWPFSRKSITCNLSDCVLLTFVCIPSAFANLLLCSLY 637


>Z98860-1|CAB11544.1|  677|Caenorhabditis elegans Hypothetical
           protein Y26G10.1 protein.
          Length = 677

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +1

Query: 172 RRYSGPGHGFG*RKIIIH*LFYVFSHVYIITFFVSYIHI 288
           RR      G+   +++I+ +FY+F    II + V Y H+
Sbjct: 600 RRIGFVDTGYPGYQMLINRIFYIFPFGSIICYIVLYFHV 638


>AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine
           receptor, class t protein8 protein.
          Length = 350

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 198 LWLKENNHSLTFLCIFSCLYNHIFCIIYTY 287
           +WL +    + F  +  C+++ I C IY +
Sbjct: 231 IWLYKTRRQIIFQALMLCVFHGIVCGIYEF 260


>AC199240-1|ABO33278.1|  427|Caenorhabditis elegans Hypothetical
           protein 2L52.1 protein.
          Length = 427

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 121 QFLEGIARRRRNGPHSEDASDNQQNNFSE 35
           +F EG  RRR+N   SED   ++  NF+E
Sbjct: 315 KFREGTRRRRKNSGESEDLKIHE--NFTE 341


>Z49911-6|CAA90132.1|  831|Caenorhabditis elegans Hypothetical
           protein M28.8 protein.
          Length = 831

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 148 VSHSLANFLQFLEGIARRRRNGPHSEDASDNQQNNF 41
           VS +L+N  QF+  +     N P++   + NQ NN+
Sbjct: 584 VSDALSN--QFITNLQTLAANAPNTTSIAKNQNNNY 617


>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
           protein C32E8.11 protein.
          Length = 1927

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
 Frame = -2

Query: 214 FSFSQSRGLGHC----SDGWTSTYDCVSH 140
           +    S G G+C    +D WT  Y C +H
Sbjct: 55  YKMHSSSGSGYCDCGDADAWTEGYACANH 83


>AC006618-6|AAK68247.1|  107|Caenorhabditis elegans Hypothetical
           protein C45B2.3 protein.
          Length = 107

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 103 QSLLGIGESWPENERRSHKCWSSRRYSGPGHGFG 204
           + L  + + W +  R   K + S +Y  P  GFG
Sbjct: 67  RDLKDLFDDWKKQTRWGQKDYRSNKYQAPKSGFG 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,770,393
Number of Sequences: 27780
Number of extensions: 132115
Number of successful extensions: 514
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)